RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 SLCO1B1Q9Y6L6 691 aa12.97□□□□□ -0.33
SMCO4-202ENST00000525141 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
SMCO4-202ENST00000525141 CHD8Q9HCK8 2581 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 I6L893 689 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CAPN9O14815 690 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 NDUFS2O75306 463 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 GLI1P08151 1106 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CHRNB2P17787 502 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 ACSL1P33121 698 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 HOXD12P35452 270 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CSKP41240 450 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 MAPK8P45983 427 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 BNC1Q01954 994 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 SLC6A3Q01959 620 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 SEMA3BQ13214 749 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 FNDC3BQ53EP0 1204 aaKnown RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 OTUD1Q5VV17 481 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 DAB2IPQ5VWQ8 1189 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 OR6B2Q6IFH4 312 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 PSAPL1Q6NUJ1 521 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 TRIM72Q6ZMU5 477 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 C14orf80Q86SX3 495 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 PIP4P1Q86T03 277 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 MFN1Q8IWA4 741 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 HJURPQ8NCD3 748 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 C1orf131Q8NDD1 294 aaKnown RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 ZNF397Q8NF99 534 aaPredicted RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CADM4Q8NFZ8 388 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 OR52K2Q8NGK3 314 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CEP76Q8TAP6 659 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 IGSF8Q969P0 613 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 ALG14Q96F25 216 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 FAM129BQ96TA1 746 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMCO4-202ENST00000525141 METRNQ9UJH8 293 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 CAPN11Q9UMQ6 739 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 WASF3Q9UPY6 502 aa12.96□□□□□ -0.33
SMCO4-202ENST00000525141 FAM170AA1A519 330 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 TTC34A8MYJ7 566 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 GJB3O75712 270 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 LUC7L3O95232 432 aaKnown RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 CYP1A1P04798 512 aaPredicted RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 CFIP05156 583 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 ATP5BP06576 529 aaKnown RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 MMEP08473 750 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 CD59P13987 128 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 CSRP1P21291 193 aaKnown RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 OXTRP30559 389 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 GABRB2P47870 512 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 IRAK1P51617 712 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 CDK17Q00537 523 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 ARID5AQ03989 594 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 PITRM1Q5JRX3 1037 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 C9orf64Q5T6V5 341 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 TAF3Q5VWG9 929 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 FBXL22Q6P050 247 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 ZDHHC17Q8IUH5 632 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 NPY6RQ99463 290 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 SUN2Q9UH99 717 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 ERVW-1Q9UQF0 538 aa12.95□□□□□ -0.34
SMCO4-202ENST00000525141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMCO4-202ENST00000525141 LRRC53A6NM62 1247 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 C10orf142B7Z368 130 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 SIN3BO75182 1162 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SMCO4-202ENST00000525141 NOS2P35228 1153 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 PRKCIP41743 596 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 DPP6P42658 865 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 NUMBP49757 651 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
SMCO4-202ENST00000525141 PLK1P53350 603 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 NOMO3P69849 1222 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 FAM193AP78312 1265 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 ZBED6P86452 979 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 FMO1Q01740 532 aa12.94□□□□□ -0.34
SMCO4-202ENST00000525141 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms