RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 USP39Q53GS9 565 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ODF2Q5BJF6 829 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PITRM1Q5JRX3 1037 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PPP1R15BQ5SWA1 713 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZFYVE27Q5T4F4 411 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 EMC10Q5UCC4 262 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TRNP1Q6NT89 227 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PKN3Q6P5Z2 889 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF783Q6ZMS7 281 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TFAP2DQ7Z6R9 452 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SETD3Q86TU7 594 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 WDR5BQ86VZ2 330 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CIR1Q86X95 450 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF354CQ86Y25 554 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PSTKQ8IV42 348 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 SFTPA1Q8IWL2 248 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 RHOT2Q8IXI1 618 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC170Q8IYT3 715 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF564Q8TBZ8 553 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HMGB4Q8WW32 186 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CENPIQ92674 756 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 EZH1Q92800 747 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 NKD2Q969F2 451 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 TBC1D31Q96DN5 1066 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PANX2Q96RD6 677 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HINFPQ9BQA5 517 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 C2orf49Q9BVC5 232 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 NUP85Q9BW27 656 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 THAP2Q9H0W7 228 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CATSPERBQ9H7T0 1116 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 FAM86C1Q9NVL1 165 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 CACNA2D2Q9NY47 1150 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 IMPACTQ9P2X3 320 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 THAP10Q9P2Z0 257 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 PPARGC1AQ9UBK2 798 aaKnown RBP5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 OR12D3Q9UGF7 316 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 RAPGEFL1Q9UHV5 662 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 HPCAL4Q9UM19 191 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 AP4E1Q9UPM8 1137 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 STON1Q9Y6Q2 735 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 R4GN57 208 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 C5orf42Q9H799 3197 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 KMT2EQ8IZD2 1858 aa5.56□□□□□ -1.52
HMGB1P40-201ENST00000525121 MYO10Q9HD67 2058 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 MIA3Q5JRA6 1907 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 IGLV3-10A0A075B6K4 115 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TCRBV5S1A1TA0A578 114 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMEM110-MUSTN1A8MSY1 372 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 H3BRJ5 948 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 K7ESF4 209 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 EEF2KO00418 725 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 FGF10O15520 208 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAP3K13O43283 966 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CREB3O43889 395 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RAMP2O60895 175 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADAM23O75077 832 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF217O75362 1048 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RPP40O75818 363 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RHOBTB1O94844 696 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 EPHX1P07099 455 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ACADMP11310 421 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RHOQP17081 205 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 L1CAMP32004 1257 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PCK1P35558 622 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PLA2G5P39877 138 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ARL4AP40617 200 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 NBL1P41271 181 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 IL12RB1P42701 662 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 GSDMDP57764 484 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ECT2LQ008S8 904 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SIM2Q14190 667 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 KRT81Q14533 505 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PLEKHG6Q3KR16 790 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 FUT11Q495W5 492 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TTC31Q49AM3 519 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 C5orf22Q49AR2 442 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ACCSLQ4AC99 568 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ERMARDQ5T6L9 678 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 SH3PXD2AQ5TCZ1 1133 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RNF43Q68DV7 783 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 IL31Q6EBC2 164 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 RETSATQ6NUM9 610 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA1324Q6UXG2 1013 aaKnown RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 PRR23BQ6ZRT6 265 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 BNIPLQ7Z465 357 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIAA0907Q7Z7F0 614 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 DSG4Q86SJ6 1040 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 C14orf80Q86SX3 495 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 ADIPOR2Q86V24 386 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 DNAAF5Q86Y56 855 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 TMTC1Q8IUR5 882 aa5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 MAML2Q8IZL2 1156 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P40-201ENST00000525121 CCDC185Q8N715 623 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms