RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 ERMARDQ5T6L9 678 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 DENND2CQ68D51 928 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 TANGO2Q6ICL3 276 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 HIBCHQ6NVY1 386 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 VSTM1Q6UX27 236 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 PPP1R21Q6ZMI0 780 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 PAQR9Q6ZVX9 377 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 ADAT2Q7Z6V5 191 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 PIGZQ86VD9 579 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 SCN4BQ8IWT1 228 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 GSPT2Q8IYD1 628 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 SIX5Q8N196 739 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 RIBC1Q8N443 379 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 EMC1Q8N766 993 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 TSEN2Q8NCE0 465 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 FLCNQ8NFG4 579 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM76AQ8TAV0 307 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 SHKBP1Q8TBC3 707 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 C2orf15Q8WU43 125 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM172AQ8WUF8 416 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 C1orf54Q8WWF1 131 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 MYLPFQ96A32 169 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 ZIM3Q96PE6 472 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 RNF157Q96PX1 679 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 NPY6RQ99463 290 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 HERPUD2Q9BSE4 406 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 LRRC3Q9BY71 257 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 SMG9Q9H0W8 520 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 ASAH2Q9NR71 780 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS11-201ENST00000524454 COMMD8Q9NX08 183 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 GOLGA6AQ9NYA3 693 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS11-201ENST00000524454 TJP2Q9UDY2 1190 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FAM153AQ9UHL3 310 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 FBXL21Q9UKT6 434 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 MAGED2Q9UNF1 606 aaPredicted RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 DUSP12Q9UNI6 340 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 R3HDM2Q9Y2K5 976 aaKnown RBP7.31□□□□□ -1.24
VPS11-201ENST00000524454 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
VPS11-201ENST00000524454 MYO16Q9Y6X6 1858 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 BCLAF3A2AJT9 711 aaKnown RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 KRBA1A5PL33 1030 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ANHXE9PGG2 379 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CLDN5O00501 218 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 APOL1O14791 398 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 NCAM2O15394 837 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CST8O60676 142 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 SHOX2O60902 331 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 SPAG6O75602 509 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 AP1G2O75843 785 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 GJB6O95452 261 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ZBED1O96006 694 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 KRT14P02533 472 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 IVLP07476 585 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 POU2F2P09086 479 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 HAPLN1P10915 354 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 TCF4P15884 667 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 FCARP24071 287 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 GABRR2P28476 465 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ADORA2BP29275 332 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ATP5DP30049 168 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ADCY8P40145 1251 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 VIPR2P41587 438 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 MAGEA6P43360 314 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CACNA2D1P54289 1103 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 PLTPP55058 493 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CDH6P55285 790 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CBX1P83916 185 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 SKOR1P84550 965 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 OTUD4Q01804 1114 aaKnown RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 ZNF33AQ06730 810 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ADIGQ0VDE8 80 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 P3H1Q32P28 736 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 MDH1BQ5I0G3 518 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 FAM78AQ5JUQ0 283 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 TRNP1Q6NT89 227 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 GAREM2Q75VX8 874 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 GSTA5Q7RTV2 222 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ANKS1BQ7Z6G8 1248 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 DNAJB7Q7Z6W7 309 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 PHLDB2Q86SQ0 1253 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 SPATA2LQ8IUW3 424 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 CDKL3Q8IVW4 592 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 UBALD2Q8IYN6 164 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 DCP1BQ8IZD4 617 aaKnown RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 ACTL9Q8TC94 416 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.3□□□□□ -1.24
VPS11-201ENST00000524454 P3H4Q92791 437 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 RSPRY1Q96DX4 576 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 PCED1BQ96HM7 432 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 ATP6V1G3Q96LB4 118 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 CCDC114Q96M63 670 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 PEBP4Q96S96 227 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 FERMT1Q9BQL6 677 aa7.3□□□□□ -1.24
VPS11-201ENST00000524454 HEMGNQ9BXL5 484 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms