RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	PRMT1	Q99873	361 aa	Known RBP	13	□□□□□ -0.33
RBBP4-215	ENST00000524393	PCED1A	Q9H1Q7	454 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	GAN	Q9H2C0	597 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	WDCP	Q9H6R7	721 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	NLRC4	Q9NPP4	1024 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	PRSS16	Q9NQE7	514 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	SCML1	Q9UN30	329 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	ERVW-1	Q9UQF0	538 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	NCKAP1	Q9Y2A7	1128 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	CEP250	Q9BV73	2442 aa		13	□□□□□ -0.33
RBBP4-215	ENST00000524393	SDK1	Q7Z5N4	2213 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	EDDM13	A0A1B0GTR0	161 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	GOLGA8S	H3BPF8	625 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	CDX4	O14627	284 aa	Predicted RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	KCNK5	O95279	499 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	NOVA1	P51513	510 aa	Known RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	NOMO3	P69849	1222 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	CDR2	Q01850	454 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	UBXN1	Q04323	297 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	ZNF177	Q13360	481 aa	Predicted RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	AUH	Q13825	339 aa	Known RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	SLC25A52	Q3SY17	297 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	DCAF12L1	Q5VU92	463 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	NAA35	Q5VZE5	725 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	FBXL22	Q6P050	247 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	LRRC31	Q6UY01	552 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	TRIM72	Q6ZMU5	477 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	MMS22L	Q6ZRQ5	1243 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	XYLT1	Q86Y38	959 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	GANC	Q8TET4	914 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	NPY6R	Q99463	290 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	BTBD1	Q9H0C5	482 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	SIK2	Q9H0K1	926 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	MIR1-1HG	Q9H1L0	117 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	SLC32A1	Q9H598	525 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	LIMA1	Q9UHB6	759 aa	Known RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	SLC25A13	Q9UJS0	675 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	INTS6	Q9UL03	887 aa	Known RBP	12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	VANGL2	Q9ULK5	521 aa		12.99	□□□□□ -0.33
RBBP4-215	ENST00000524393	ITIH6	Q6UXX5	1313 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	WDR87	Q6ZQQ6	2873 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393		A0A1B0GTW7	788 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	TARSL2	A2RTX5	802 aa	Known RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	LGALS16	A8MUM7	142 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	METTL12	A8MUP2	240 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	ARHGAP33	O14559	1287 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	OPHN1	O60890	802 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	PAGE1	O75459	146 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	CLDN11	O75508	207 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	PDGFRA	P16234	1089 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	MAOB	P27338	520 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	KLK7	P49862	253 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	RPS14	P62263	151 aa	Known RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	CENPC	Q03188	943 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	ARID5B	Q14865	1188 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	PSAPL1	Q6NUJ1	521 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	CIR1	Q86X95	450 aa	Predicted RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	DHX40	Q8IX18	779 aa	Known RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	APCDD1	Q8J025	514 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	CPA5	Q8WXQ8	436 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	DNASE2B	Q8WZ79	361 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	SNX19	Q92543	992 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	PGAP3	Q96FM1	320 aa	Predicted RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	MYO19	Q96H55	970 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	ZDHHC5	Q9C0B5	715 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	TKTL2	Q9H0I9	626 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	SGK2	Q9HBY8	427 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	CAPN10	Q9HC96	672 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	PIGV	Q9NUD9	493 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	HS3ST4	Q9Y661	456 aa		12.98	□□□□□ -0.33
RBBP4-215	ENST00000524393	FAM170A	A1A519	330 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	SIN3B	O75182	1162 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	SEMA4F	O95754	770 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CCDC172	P0C7W6	258 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CEACAM1	P13688	526 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	ZNF18	P17022	549 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CSRP1	P21291	193 aa	Known RBP	12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CTSO	P43234	321 aa	Predicted RBP	12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CXCR3	P49682	368 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	CDH4	P55283	916 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	JAM2	P57087	298 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	TYRO3	Q06418	890 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	SH3PXD2A	Q5TCZ1	1133 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	USP30	Q70CQ3	517 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	ZCCHC9	Q8N567	271 aa	Known RBP	12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	MINDY1	Q8N5J2	469 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	AOPEP	Q8N6M6	819 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	SLC20A1	Q8WUM9	679 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	IGSF8	Q969P0	613 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	RPL10L	Q96L21	214 aa	Known RBP	12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	MRGPRX3	Q96LB0	322 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	TBCB	Q99426	244 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	OMD	Q99983	421 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	MUC3B	Q9H195	1237 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	ARHGEF38	Q9NXL2	777 aa		12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	NOCT	Q9UK39	431 aa	Known RBP	12.97	□□□□□ -0.33
RBBP4-215	ENST00000524393	VPS28	Q9UK41	221 aa		12.97	□□□□□ -0.33

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