RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	CSDE1	O75534	798 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SNUPN	O95149	360 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	APOC2	P02655	101 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ITGB1	P05556	798 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	KRT7	P08729	469 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	GSTA2	P09210	222 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	WEE2	P0C1S8	567 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	NEFH	P12036	1026 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TNNI1	P19237	187 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	EIF4B	P23588	611 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	DNAJB1	P25685	340 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SERPINB3	P29508	390 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	PCK1	P35558	622 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	LTBR	P36941	435 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SSR1	P43307	286 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SERPINB4	P48594	390 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ACOT2	P49753	483 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	GATM	P50440	423 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	RAB27A	P51159	221 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CLCN3	P51790	818 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ROR2	Q01974	943 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	OVGP1	Q12889	678 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ADAM15	Q13444	863 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CAMK1	Q14012	370 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	LAPTM4A	Q15012	233 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	PTPN20	Q4JDL3	420 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	XKR3	Q5GH77	459 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TMEM31	Q5JXX7	168 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SPOUT1	Q5T280	376 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	FOXB2	Q5VYV0	432 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CES4A	Q5XG92	561 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TRIM68	Q6AZZ1	485 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	MRPL14	Q6P1L8	145 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TMEM154	Q6P9G4	183 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	KYAT3	Q6YP21	454 aa	Known RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	NET1	Q7Z628	596 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ADGRG6	Q86SQ4	1221 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TTC7B	Q86TV6	843 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	LRRC6	Q86X45	466 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	WDR49	Q8IV35	697 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	IGDCC3	Q8IVU1	814 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	UNC45B	Q8IWX7	931 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	GALNT15	Q8N3T1	639 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	PHC3	Q8NDX5	983 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CMAS	Q8NFW8	434 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	JOSD2	Q8TAC2	188 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	RAB3IL1	Q8TBN0	382 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	UCMA	Q8WVF2	138 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	POF1B	Q8WVV4	589 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	TFAP2B	Q92481	460 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	NCSTN	Q92542	709 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	PPP2R3C	Q969Q6	453 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ACSF2	Q96CM8	615 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	OXNAD1	Q96HP4	312 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ZBTB45	Q96K62	511 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CYTH2	Q99418	400 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	OSMR	Q99650	979 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	NIF3L1	Q9GZT8	377 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	LHX5	Q9H2C1	402 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	ADAMTS10	Q9H324	1103 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	FBXO6	Q9NRD1	293 aa	Predicted RBP	8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	KCNK4	Q9NYG8	393 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	SIRPG	Q9P1W8	387 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	WDR35	Q9P2L0	1181 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	CYTH4	Q9UIA0	394 aa		8.06	□□□□□ -1.12
SPIDR-223	ENST00000524033	KLHL33	A6NCF5	533 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033		C9IYK1	514 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	GOLGA8S	H3BPF8	625 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	GOLGA8M	H3BSY2	632 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	CHAD	O15335	359 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	CST8	O60676	142 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	SNN	O75324	88 aa	Predicted RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	MT-ND3	P03897	115 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	PDHA1	P08559	390 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	IL9	P15248	144 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	BGN	P21810	368 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	PRKCH	P24723	683 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	STIP1	P31948	543 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	ELK3	P41970	407 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	MAGEA3	P43357	314 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	YWHAZ	P63104	245 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	MXRA7	P84157	204 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	CDC42EP1	Q00587	391 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	DLX2	Q07687	328 aa	Predicted RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	HNRNPD	Q14103	355 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	TARBP2	Q15633	366 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	MUM1	Q2TAK8	710 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	TRMT5	Q32P41	509 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	BBS9	Q3SYG4	887 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	TMCO4	Q5TGY1	634 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	DENND1B	Q6P3S1	775 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	C3orf62	Q6ZUJ4	267 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	RBM23	Q86U06	439 aa	Known RBP	8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	XYLT1	Q86Y38	959 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	TREML1	Q86YW5	311 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	TRIM42	Q8IWZ5	723 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	ARHGAP24	Q8N264	748 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	LRRC71	Q8N4P6	559 aa		8.05	□□□□□ -1.12
SPIDR-223	ENST00000524033	MCRS1	Q96EZ8	462 aa		8.05	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms