RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 KIRREL3Q8IZU9 778 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC40A1Q9NP59 571 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 TELO2Q9Y4R8 837 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 PIGRP01833 764 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 CKBP12277 381 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITGB6P18564 788 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 DUSP4Q13115 394 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 TMEM259Q4ZIN3 620 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 FCRL2Q96LA5 508 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 TMEM120AQ9BXJ8 343 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC13A4Q9UKG4 626 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 PCDHGB4Q9UN71 923 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITGB4P16144 1822 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 COL18A1P39060 1754 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 TLR5O60602 858 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 DDX39BQ13838 428 aaKnown RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 SPANXN3Q5MJ09 141 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 E9PBE3 544 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 FGF10O15520 208 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 KLHL41O60662 606 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 RGS20O76081 388 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 CFHP08603 1231 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 UNGP13051 313 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 CCNB1P14635 433 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 MAXP61244 160 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 CDK16Q00536 496 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 OLFML2BQ68BL8 750 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 SPATA17Q96L03 361 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 MDM4O15151 490 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 LZTS3O60299 673 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 HDCP19113 662 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITIH4Q14624 930 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 CSPG4P5Q96PW8 444 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
PCDHGB1-201ENST00000523390 ARL5CA6NH57 179 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 A8MX80 341 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 GRK2P25098 689 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 CD86P42081 329 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 CDKN2BP42772 138 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 ASPAP45381 313 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PDPK2PQ6A1A2 396 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 IQCKQ8N0W5 287 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 P2RY11Q96G91 374 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 POLR1EQ9GZS1 481 aaKnown RBP13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 TMEM247A6NEH6 219 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 RPA3P35244 121 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SERPINB5P36952 375 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PLK1P53350 603 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SKOR1P84550 965 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SPDYCQ5MJ68 293 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 DENND1CQ8IV53 801 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SELPP16109 830 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SCTRP47872 440 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 NUDT2P50583 147 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 COPAP53621 1224 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 NOMO1Q15155 1222 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 SEL1L3Q68CR1 1132 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 UGT3A1Q6NUS8 523 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 NCKIPSDQ9NZQ3 722 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 TAF1P21675 1872 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYH1P12882 1939 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 RBP1P09455 135 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 PIRTP0C851 137 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 NDUFV1P49821 464 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 ABCE1P61221 599 aaKnown RBP13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZYG11BQ9C0D3 744 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 DNMT3LQ9UJW3 386 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 CRYL1Q9Y2S2 319 aa13.34□□□□□ -0.27
PCDHGB1-201ENST00000523390 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.27
PCDHGB1-201ENST00000523390 TRPC5OSA6NMA1 111 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 NUDT17P0C025 328 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms