RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SLC8A1P32418 973 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 CTSOP43234 321 aaPredicted RBP23.56■■□□□ 1.36
PVT1-218ENST00000523328 SEMG2Q02383 582 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 TARDBPQ13148 414 aaKnown RBP eCLIP23.56■■□□□ 1.36
PVT1-218ENST00000523328 RTP5Q14D33 572 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 PITRM1Q5JRX3 1037 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 HES3Q5TGS1 186 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 TCERG1LQ5VWI1 586 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 FBXL19Q6PCT2 694 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 KRBA2Q6ZNG9 492 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 SMYD4Q8IYR2 804 aaPredicted RBP23.56■■□□□ 1.36
PVT1-218ENST00000523328 CARNMT1Q8N4J0 409 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 AADATQ8N5Z0 425 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 FCRL2Q96LA5 508 aaPredicted RBP23.56■■□□□ 1.36
PVT1-218ENST00000523328 FAM129BQ96TA1 746 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 KIAA1257Q9ULG3 409 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 TK2O00142 265 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 ADPRHP54922 357 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 NXPH1P58417 271 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 C19orf57Q0VDD7 668 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 DCAF17Q5H9S7 520 aaPredicted RBP23.55■■□□□ 1.36
PVT1-218ENST00000523328 SLC39A7Q92504 469 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 SPATA32Q96LK8 384 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 ZSWIM1Q9BR11 485 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 NRSN2Q9GZP1 204 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 NUCKS1Q9H1E3 243 aaKnown RBP23.55■■□□□ 1.36
PVT1-218ENST00000523328 RAI2Q9Y5P3 530 aa23.55■■□□□ 1.36
PVT1-218ENST00000523328 EDDM13A0A1B0GTR0 161 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 TYW5A2RUC4 315 aaKnown RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 ATXN7O15265 892 aaPredicted RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 FYNP06241 537 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 HSP90AA1P07900 732 aaKnown RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 SRPRAP08240 638 aaKnown RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 GOT1P17174 413 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 ARRB1P49407 418 aaPredicted RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 BNIP3Q12983 259 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 CDH18Q13634 790 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 MS4A13Q5J8X5 152 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 SFMBT2Q5VUG0 894 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 SND1Q7KZF4 910 aaKnown RBP eCLIP23.54■■□□□ 1.36
PVT1-218ENST00000523328 KANSL1Q7Z3B3 1105 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 SERAC1Q96JX3 654 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 DDX50Q9BQ39 737 aaKnown RBP23.54■■□□□ 1.36
PVT1-218ENST00000523328 SLCO3A1Q9UIG8 710 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 AK5Q9Y6K8 562 aa23.54■■□□□ 1.36
PVT1-218ENST00000523328 TLR4O00206 839 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 LATO43561 262 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 LUC7L3O95232 432 aaKnown RBP23.53■■□□□ 1.36
PVT1-218ENST00000523328 PAEPP09466 180 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 RXRGP48443 463 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 PSMD8P48556 350 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 LRMPQ12912 555 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 LRRC69Q6ZNQ3 347 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 CFAP52Q8N1V2 620 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 STK40Q8N2I9 435 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 OR14C36Q8NHC7 312 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 DQX1Q8TE96 717 aaKnown RBP23.53■■□□□ 1.36
PVT1-218ENST00000523328 PTPRN2Q92932 1015 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 SLC39A13Q96H72 371 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 ERVMER34-1Q9H9K5 563 aa23.53■■□□□ 1.36
PVT1-218ENST00000523328 TPX2Q9ULW0 747 aaKnown RBP23.53■■□□□ 1.36
PVT1-218ENST00000523328 ASH1LQ9NR48 2969 aaKnown RBP23.53■■□□□ 1.36
PVT1-218ENST00000523328 SLC16A3O15427 465 aaKnown RBP23.52■■□□□ 1.36
PVT1-218ENST00000523328 C5AR1P21730 350 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 TBXAS1P24557 533 aaPredicted RBP23.52■■□□□ 1.36
PVT1-218ENST00000523328 PPP2CBP62714 309 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 PPP2CAP67775 309 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 ECT2LQ008S8 904 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 NNTQ13423 1086 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 CNGA2Q16280 664 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 DCAF6Q58WW2 860 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 TMEM270Q6UE05 265 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 SPATS2Q86XZ4 545 aaKnown RBP23.52■■□□□ 1.36
PVT1-218ENST00000523328 SNIP1Q8TAD8 396 aaKnown RBP23.52■■□□□ 1.36
PVT1-218ENST00000523328 SLC35C1Q96A29 364 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 HSFY1Q96LI6 401 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 GOLPH3LQ9H4A5 285 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 TLR6Q9Y2C9 796 aa23.52■■□□□ 1.36
PVT1-218ENST00000523328 M0QYV0 167 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 ADH1BP00325 375 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 DRD3P35462 400 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 ILKQ13418 452 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 CCDC117Q8IWD4 279 aaPredicted RBP23.51■■□□□ 1.35
PVT1-218ENST00000523328 HSCBQ8IWL3 235 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 APCDD1Q8J025 514 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 FAM131CQ96AQ9 280 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 RPL10LQ96L21 214 aaKnown RBP23.51■■□□□ 1.35
PVT1-218ENST00000523328 SERPINB11Q96P15 392 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 FCRL3Q96P31 734 aaPredicted RBP23.51■■□□□ 1.35
PVT1-218ENST00000523328 ARHGAP20Q9P2F6 1191 aa23.51■■□□□ 1.35
PVT1-218ENST00000523328 XPO7Q9UIA9 1087 aaKnown RBP23.51■■□□□ 1.35
PVT1-218ENST00000523328 RNF225M0QZC1 329 aaPredicted RBP23.5■■□□□ 1.35
PVT1-218ENST00000523328 RRP8O43159 456 aaKnown RBP23.5■■□□□ 1.35
PVT1-218ENST00000523328 FBXO21O94952 628 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 MOCS3O95396 460 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
PVT1-218ENST00000523328 MZF1P28698 734 aaPredicted RBP23.5■■□□□ 1.35
PVT1-218ENST00000523328 PRCPP42785 496 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 KRT85P78386 507 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 SLC45A4Q5BKX6 768 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms