RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 NOMO3P69849 1222 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 ECT2LQ008S8 904 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 NCAPHQ15003 741 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 STX1AQ16623 288 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 HNRNPA1L2Q32P51 320 aaKnown RBP19.29■□□□□ 0.68
SPIDR-220ENST00000522900 FKBP15Q5T1M5 1219 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 FAM102AQ5T9C2 384 aaPredicted RBP19.29■□□□□ 0.68
SPIDR-220ENST00000522900 DCAF12L1Q5VU92 463 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 NAA35Q5VZE5 725 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 DHX40Q8IX18 779 aaKnown RBP19.29■□□□□ 0.68
SPIDR-220ENST00000522900 CADM4Q8NFZ8 388 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 OR52K2Q8NGK3 314 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 DNASE2BQ8WZ79 361 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 NT5C3BQ969T7 300 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 TBCBQ99426 244 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 SIK2Q9H0K1 926 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 HSD3B7Q9H2F3 369 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
SPIDR-220ENST00000522900 VANGL2Q9ULK5 521 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 SNX10Q9Y5X0 201 aa19.29■□□□□ 0.68
SPIDR-220ENST00000522900 SPTBN2O15020 2390 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 MEI4A8MW99 385 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 GOLGA8SH3BPF8 625 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 CXCR3P49682 368 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 STK19P49842 368 aaPredicted RBP19.28■□□□□ 0.68
SPIDR-220ENST00000522900 SULT1E1P49888 294 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 JAM2P57087 298 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 MYL5Q02045 173 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 SYCP1Q15431 976 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 RABGAP1LQ5R372 815 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 CCDC183Q5T5S1 534 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 C9orf64Q5T6V5 341 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 SH3PXD2AQ5TCZ1 1133 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 CXorf57Q6NSI4 855 aaKnown RBP19.28■□□□□ 0.68
SPIDR-220ENST00000522900 RPRD1AQ96P16 312 aaPredicted RBP19.28■□□□□ 0.68
SPIDR-220ENST00000522900 TKTL2Q9H0I9 626 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 MIR1-1HGQ9H1L0 117 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 RSPH9Q9H1X1 276 aaPredicted RBP19.28■□□□□ 0.68
SPIDR-220ENST00000522900 C6orf106Q9H6K1 298 aaPredicted RBP19.28■□□□□ 0.68
SPIDR-220ENST00000522900 TMPRSS4Q9NRS4 437 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 CKAP5Q14008 2032 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 GON4LQ3T8J9 2241 aa19.28■□□□□ 0.68
SPIDR-220ENST00000522900 ARHGAP33O14559 1287 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 MOCS3O95396 460 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 LSM8O95777 96 aaKnown RBP19.27■□□□□ 0.68
SPIDR-220ENST00000522900 DNTTP04053 509 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 TPM2P07951 284 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 SRPRAP08240 638 aaKnown RBP19.27■□□□□ 0.68
SPIDR-220ENST00000522900 ZNF18P17022 549 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 SOX5P35711 763 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 FLT3P36888 993 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 SCNN1AP37088 669 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 NOVA1P51513 510 aaKnown RBP19.27■□□□□ 0.68
SPIDR-220ENST00000522900 ZNF776Q68DI1 518 aaPredicted RBP19.27■□□□□ 0.68
SPIDR-220ENST00000522900 APTXQ7Z2E3 356 aaKnown RBP19.27■□□□□ 0.68
SPIDR-220ENST00000522900 RABEPKQ7Z6M1 372 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 PHLDB2Q86SQ0 1253 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 KDM1BQ8NB78 822 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 ALG14Q96F25 216 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 WDCPQ9H6R7 721 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 FBRSQ9HAH7 460 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 ARHGEF38Q9NXL2 777 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 RRN3Q9NYV6 651 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 TMEM59LQ9UK28 342 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 SLCO1B1Q9Y6L6 691 aa19.27■□□□□ 0.68
SPIDR-220ENST00000522900 A0A1B0GVM2 712 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 TCAF2A6NFQ2 919 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 LRRC10BA6NIK2 292 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 LGALS16A8MUM7 142 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 CNTN5O94779 1100 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 MBD3O95983 291 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 CYP1A1P04798 512 aaPredicted RBP19.26■□□□□ 0.67
SPIDR-220ENST00000522900 VAV1P15498 845 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 PLK1P53350 603 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 FMO1Q01740 532 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 CDR2Q01850 454 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 ZBTB16Q05516 673 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 DEUP1Q05D60 604 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 SLC12A1Q13621 1099 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 ARID5BQ14865 1188 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 SLC25A52Q3SY17 297 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 TTC39BQ5VTQ0 682 aaPredicted RBP19.26■□□□□ 0.67
SPIDR-220ENST00000522900 ZCCHC9Q8N567 271 aaKnown RBP19.26■□□□□ 0.67
SPIDR-220ENST00000522900 MINDY1Q8N5J2 469 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 C1orf216Q8TAB5 229 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 SLC30A5Q8TAD4 765 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 PGAP3Q96FM1 320 aaPredicted RBP19.26■□□□□ 0.67
SPIDR-220ENST00000522900 FAM129BQ96TA1 746 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 SERGEFQ9UGK8 458 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 EIF2B4Q9UI10 523 aaKnown RBP19.26■□□□□ 0.67
SPIDR-220ENST00000522900 STAP1Q9ULZ2 295 aa19.26■□□□□ 0.67
SPIDR-220ENST00000522900 CEP192Q8TEP8 1941 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 GNSP15586 552 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 CDK11BP21127 795 aaKnown RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ATXN3P54252 364 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 UBXN1Q04323 297 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms