RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GCNAQ96QF7 691 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 TARS2Q9BW92 718 aaKnown RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 PRDM16Q9HAZ2 1276 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 ERVK13-1Q9NX77 482 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 GCNT4Q9P109 453 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 CALCOCO1Q9P1Z2 691 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 BCCIPQ9P287 314 aaKnown RBP eCLIP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 DOPEY2Q9Y3R5 2298 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 C2orf78A6NCI8 922 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 PLK4O00444 970 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 DEXIO95424 95 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 CYP17A1P05093 508 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 CXCL8P10145 99 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 HARSP12081 509 aaKnown RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 DDX6P26196 483 aaKnown RBP eCLIP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 CTSKP43235 329 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 LIMS1P48059 325 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 TUFMP49411 452 aaKnown RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 EFNA5P52803 228 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 NR1I3Q14994 352 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 LMBRD2Q68DH5 695 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 GALNT17Q6IS24 598 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 DSTYKQ6XUX3 929 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 RABEPKQ7Z6M1 372 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 MIB1Q86YT6 1006 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 ARL14EPQ8N8R7 260 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 SH3RF2Q8TEC5 729 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 SETD7Q8WTS6 366 aaKnown RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 EXOC4Q96A65 974 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 ZNF419Q96HQ0 510 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 CCDC43Q96MW1 224 aaKnown RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 MTMR9Q96QG7 549 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 TTC12Q9H892 705 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 TMLHEQ9NVH6 421 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 SUCOQ9UBS9 1254 aaKnown RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 PPT2Q9UMR5 302 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 PCDHA12Q9UN75 941 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 SCN1AP35498 2009 aa7.11□□□□□ -1.27
SDCBP-210ENST00000522843 UBR5O95071 2799 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-210ENST00000522843 RELNP78509 3460 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 PHLPP2Q6ZVD8 1323 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 A0A1W2PQF6 199 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 TTC26A0AVF1 554 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 K7ERI5 159 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 KAT7O95251 611 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 BAG4O95429 457 aaKnown RBP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 KRT10P13645 584 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 NPTX2P47972 431 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 MAPKAPK2P49137 400 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 LILRA4P59901 499 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 SSRP1Q08945 709 aaKnown RBP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 BYSLQ13895 437 aaKnown RBP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 VEPH1Q14D04 833 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 SAFBQ15424 915 aaKnown RBP eCLIP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 EOGTQ5NDL2 527 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 TDRD10Q5VZ19 366 aaKnown RBP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 FBXW10Q5XX13 1052 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 SLC36A4Q6YBV0 504 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 GPR155Q7Z3F1 870 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 USP37Q86T82 979 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 FMNL3Q8IVF7 1028 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 DAW1Q8N136 415 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 GALNT15Q8N3T1 639 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 CCDC26Q8TAB7 109 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 MRPS31Q92665 395 aaKnown RBP7.1□□□□□ -1.27
SDCBP-210ENST00000522843 ERLEC1Q96DZ1 483 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 SENP8Q96LD8 212 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 CDADC1Q9BWV3 514 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 TMEM60Q9H2L4 133 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 ARHGAP28Q9P2N2 729 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 SLCO1B1Q9Y6L6 691 aa7.1□□□□□ -1.27
SDCBP-210ENST00000522843 MYO9AB2RTY4 2548 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 CAPN9O14815 690 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 SHOXO15266 292 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 NOL4O94818 638 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 NFATC1O95644 943 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 CKMP06732 381 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 HMGB1P09429 215 aaKnown RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 ZNF883P0CG24 379 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 CYP3A5P20815 502 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TNFSF9P41273 254 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TLE3Q04726 772 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 KDSRQ06136 332 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TOB2Q14106 344 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 KRT32Q14532 448 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 PPP2R5AQ15172 486 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 RABEP1Q15276 862 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 DHCR24Q15392 516 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 CALCRLQ16602 461 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 DDR2Q16832 855 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 CCDC142Q17RM4 750 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 ARMCX5Q6P1M9 558 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 RHBDF2Q6PJF5 856 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 DHRS13Q6UX07 377 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 FILIP1Q7Z7B0 1213 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 ADGRG2Q8IZP9 1017 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms