RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CPXM1Q96SM3 734 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 FBXL12Q9NXK8 326 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 AJAP1Q9UKB5 411 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 INTS6Q9UL03 887 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SLCO1B1Q9Y6L6 691 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 IGF2RP11717 2491 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 PCNX2A6NKB5 2137 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 KCNU1A8MYU2 1149 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 RNASEH2AO75792 299 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 ASLP04424 464 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 PDGFRAP16234 1089 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 CCR1P32246 355 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 CLCN1P35523 988 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 MATKP42679 507 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 STK19P49842 368 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 DPCR1Q3MIW9 517 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 TTC31Q49AM3 519 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 ACCSLQ4AC99 568 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 VWA3BQ502W6 1294 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 LAYNQ6UX15 382 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 C11orf57Q6ZUT1 292 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 FAM183BPQ6ZVS7 135 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 ADAT2Q7Z6V5 191 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 NAXDQ8IW45 347 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 CCAR2Q8N163 923 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 SHC3Q92529 594 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 LMLNQ96KR4 655 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 MRGPRX3Q96LB0 322 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 RPRD1AQ96P16 312 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 OMDQ99983 421 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 ZDHHC5Q9C0B5 715 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 NDST4Q9H3R1 872 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 CLSTN2Q9H4D0 955 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 SIX2Q9NPC8 291 aa10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-235ENST00000522730 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PLXND1Q9Y4D7 1925 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 TNRC6BQ9UPQ9 1833 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 A0A1W2PP55 124 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 UPK3BL1B0FP48 263 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 UPK3BL2E5RIL1 263 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 M0QYT0 321 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 MID1O15344 667 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 BNIP3LO60238 219 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 HSF2BPO75031 334 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 IL1BP01584 269 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 IGLV3-19P01714 112 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 ERBB2P04626 1255 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PROS1P07225 676 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC2A3P11169 496 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 MZF1P28698 734 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC8A1P32418 973 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 GGCXP38435 758 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 NNMTP40261 264 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PSMD8P48556 350 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 AFF3P51826 1226 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SNX16P57768 344 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 BNC1Q01954 994 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC6A3Q01959 620 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 CENPCQ03188 943 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 ZBTB16Q05516 673 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC14A1Q13336 389 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 NNTQ13423 1086 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 TEAD4Q15561 434 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 MAN2A1Q16706 1144 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 KIF19Q2TAC6 998 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 HNRNPA1L2Q32P51 320 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 CCDC157Q569K6 752 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 RABGAP1LQ5R372 815 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PRAMEF14Q5SWL7 426 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 C9orf64Q5T6V5 341 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 BEND5Q7L4P6 421 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 STK40Q8N2I9 435 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 RHBDD1Q8TEB9 315 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 BIRC7Q96CA5 298 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 MYO19Q96H55 970 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 TUBGCP2Q9BSJ2 902 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 ADAM33Q9BZ11 813 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 RSPH9Q9H1X1 276 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 NEUROG2Q9H2A3 272 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 PABPC3Q9H361 631 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 FBRSQ9HAH7 460 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SGK2Q9HBY8 427 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 TM9SF3Q9HD45 589 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 TM7SF3Q9NS93 570 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 KLK13Q9UKR3 277 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 VANGL2Q9ULK5 521 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 SNX11Q9Y5W9 270 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 CFAP47Q6ZTR5 3102 aa10.57□□□□□ -0.72
CTNNA1-235ENST00000522730 DSPP15924 2871 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms