RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TIMM13Q9Y5L4 95 aaPredicted RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CLUHO75153 1309 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 FOXO6A8MYZ6 492 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 RAG1P15918 1043 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 AKAP5P24588 427 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 GTF2A2P52657 109 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ZFP1Q6P2D0 407 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 MAB21L3Q8N8X9 362 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 OTULINQ96BN8 352 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 APBA2Q99767 749 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 TMEM79Q9BSE2 394 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 C2CD2Q9Y426 696 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ASTN2O75129 1339 aaPredicted RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 CCDC88AQ3V6T2 1871 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ERI2A8K979 691 aaKnown RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 WDR47O94967 919 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 RENBPP51606 427 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF143P52747 638 aaPredicted RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 ADCK2Q7Z695 626 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 IL31RAQ8NI17 732 aa14.1□□□□□ -0.15
SYNPO-205ENST00000522122 DIS3LQ8TF46 1054 aaKnown RBP14.1□□□□□ -0.15
SYNPO-205ENST00000522122 FAM237BA0A1B0GVD1 139 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 USP12O75317 370 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 BAIAP3O94812 1187 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 CYP1A1P04798 512 aaPredicted RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SERPIND1P05546 499 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 FASP25445 335 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 OXCT1P55809 520 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 DEFA1P59665 94 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 DEFA3P59666 94 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 TGFB2P61812 414 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF470Q6ECI4 717 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 CLNKQ7Z7G1 428 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 LZTR1Q8N653 840 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 COLEC11Q9BWP8 271 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SLC12A8A0AV02 714 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 YBX3P16989 372 aaKnown RBP eCLIP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 TMED10P49755 219 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SLC1A5Q15758 541 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 FAM9CQ8IZT9 166 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SNRNP27Q8WVK2 155 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 BORCS6Q96GS4 357 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 RNF157Q96PX1 679 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 CLPBQ9H078 707 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SPASTQ9UBP0 616 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 PCDHAC2Q9Y5I4 1007 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ASS1P00966 412 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 UBA1P22314 1058 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 LRRC8DQ7L1W4 858 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 TMC7Q7Z402 723 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 HOMEZQ8IX15 550 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ARL8BQ9NVJ2 186 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 TMEM191CA6NGB0 347 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 HUNKP57058 714 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 FASTKQ14296 549 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 TRIM60Q495X7 471 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 NPNTQ6UXI9 565 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ADAM32Q8TC27 787 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 PPP1R10Q96QC0 940 aaKnown RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 NR1H4Q96RI1 486 aaPredicted RBP14.09□□□□□ -0.15
SYNPO-205ENST00000522122 SH3GL1Q99961 368 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 ANKRD6Q9Y2G4 727 aa14.09□□□□□ -0.15
SYNPO-205ENST00000522122 A0A0A0MRY4 1105 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 CREB1P16220 341 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 BST1Q10588 318 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 MYO1HQ8N1T3 1032 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 OR6Y1Q8NGX8 325 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 SPATA13Q96N96 652 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 IMPAD1Q9NX62 359 aa14.08□□□□□ -0.15
SYNPO-205ENST00000522122 UTP6Q9NYH9 597 aaKnown RBP14.08□□□□□ -0.15
SYNPO-205ENST00000522122 PIGNO95427 931 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TGDSO95455 350 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 SERPINF2P08697 491 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 ANPEPP15144 967 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 SERPINB1P30740 379 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 CSTF3Q12996 717 aaKnown RBP14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TRIM16LQ309B1 348 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 DRICH1Q6PGQ1 229 aaPredicted RBP14.08□□□□□ -0.16
SYNPO-205ENST00000522122 BHMTQ93088 406 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 TXLNGYQ9BZA5 131 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 PRDM16Q9HAZ2 1276 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 ADARB2Q9NS39 739 aaKnown RBP14.08□□□□□ -0.16
SYNPO-205ENST00000522122 MAST2Q6P0Q8 1798 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 NFASCO94856 1347 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 CASTOR2A6NHX0 329 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 SAC3D1A6NKF1 404 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 GOLGA8TH3BQL2 631 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 CXCL11O14625 94 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 MRASO14807 208 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 SLC44A4Q53GD3 710 aa14.08□□□□□ -0.16
SYNPO-205ENST00000522122 RIPOR1Q6ZS17 1223 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms