RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 IGSF8Q969P0 613 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 MYO19Q96H55 970 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 PANX2Q96RD6 677 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 XPO7Q9UIA9 1087 aaKnown RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 AKR1B15C9JRZ8 316 aaPredicted RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 E9PAM4 449 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 FGF10O15520 208 aaPredicted RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 CCP110O43303 1012 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 ATP9BO43861 1147 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 TMEM253P0C7T8 217 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 OXTRP30559 389 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 HOXD12P35452 270 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 P2RY2P41231 377 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 ZNF75DP51815 510 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 SFSWAPQ12872 951 aaKnown RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 ZNF234Q14588 700 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 PLEKHG6Q3KR16 790 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 FAM172AQ8WUF8 416 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 CEP44Q9C0F1 390 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 RBSNQ9H1K0 784 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 PRDM16Q9HAZ2 1276 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 ABCB8Q9NUT2 735 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 C2orf42Q9NWW7 574 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 USP36Q9P275 1121 aaKnown RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 IMPACTQ9P2X3 320 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 CNOT8Q9UFF9 292 aaKnown RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 INTS6Q9UL03 887 aaKnown RBP9.75□□□□□ -0.85
CLK4-209ENST00000521621 HS3ST2Q9Y278 367 aa9.75□□□□□ -0.85
CLK4-209ENST00000521621 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 ZNF487B1APH4 448 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 TSPAN3O60637 253 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 EPN2O95208 641 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 HOXB2P14652 356 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 CD70P32970 193 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 TIE1P35590 1138 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 ARHGAP25P42331 645 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 RPS24P62847 133 aaKnown RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 ZNF177Q13360 481 aaPredicted RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 CDH18Q13634 790 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 ALKBH5Q6P6C2 394 aaKnown RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 TMC6Q7Z403 805 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 CCDC170Q8IYT3 715 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 DCAF4L2Q8NA75 395 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 CASKIN2Q8WXE0 1202 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 MCEEQ96PE7 176 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 ACE2Q9BYF1 805 aaPredicted RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 RCOR3Q9P2K3 495 aaPredicted RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 ERVW-1Q9UQF0 538 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 A0A087X0T9 212 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 SCAMP3O14828 347 aaKnown RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 RHOBTB1O94844 696 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 FAM228BP0C875 321 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 SKILP12757 684 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 FNTBP49356 437 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 KRT83P78385 493 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 ZNF252P-AS1Q0IIN9 211 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 STARD3Q14849 445 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 USP39Q53GS9 565 aaKnown RBP9.74□□□□□ -0.85
CLK4-209ENST00000521621 TMCO4Q5TGY1 634 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 SFTPA1Q8IWL2 248 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 EMC1Q8N766 993 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 OR2T3Q8NH03 318 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 WFDC5Q8TCV5 224 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 FEM1AQ9BSK4 669 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 MAGEH1Q9H213 219 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 ITM2CQ9NQX7 267 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 IP6K2Q9UHH9 426 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 ADAMTS1Q9UHI8 967 aa9.74□□□□□ -0.85
CLK4-209ENST00000521621 MYOFQ9NZM1 2061 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 EDDM13A0A1B0GTR0 161 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 H0Y626 953 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 AP5Z1O43299 807 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 HRO43593 1189 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 RETP07949 1114 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 H2AFZP0C0S5 128 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 GABRG2P18507 467 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 IL12RB1P42701 662 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 COPAP53621 1224 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 SEC13P55735 322 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 GEMIN4P57678 1058 aaKnown RBP9.73□□□□□ -0.85
CLK4-209ENST00000521621 YBEYP58557 167 aaPredicted RBP9.73□□□□□ -0.85
CLK4-209ENST00000521621 RPL7AP62424 266 aaKnown RBP9.73□□□□□ -0.85
CLK4-209ENST00000521621 OGDHQ02218 1023 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 HNRNPA1L2Q32P51 320 aaKnown RBP9.73□□□□□ -0.85
CLK4-209ENST00000521621 C2orf27AQ580R0 203 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 EFHC2Q5JST6 749 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 DCUN1D2Q6PH85 259 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 USP30Q70CQ3 517 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 H2AFVQ71UI9 128 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 C14orf80Q86SX3 495 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 ISG20Q96AZ6 181 aaKnown RBP9.73□□□□□ -0.85
CLK4-209ENST00000521621 ZNF653Q96CK0 615 aa9.73□□□□□ -0.85
CLK4-209ENST00000521621 TBC1D31Q96DN5 1066 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms