RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BCORQ6W2J9 1755 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 LRP5O75197 1615 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 EP400Q96L91 3159 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 SNED1Q8TER0 1413 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 A8MVJ9 347 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 VSTM5A8MXK1 200 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 SNAP23O00161 211 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 RAB27BO00194 218 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 FOXN3O00409 490 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 TP73O15350 636 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 PPIP5K2O43314 1243 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 PRC1O43663 620 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 IGHDP01880 384 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 SLC5A1P13866 664 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 ARHGAP25P42331 645 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 COPB1P53618 953 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 TIMM10P62072 90 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 PSG6Q00889 435 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 GHRHRQ02643 423 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 LMAN2Q12907 356 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 KLF9Q13886 244 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 HLTFQ14527 1009 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 GBX1Q14549 363 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 NPY5RQ15761 445 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 C3orf38Q5JPI3 329 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 SLC2A7Q6PXP3 512 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 MRPL10Q7Z7H8 261 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 CCAR1Q8IX12 1150 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 SMC5Q8IY18 1101 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 CLASRPQ8N2M8 674 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 FAM156AQ8NDB6 213 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 TDRD7Q8NHU6 1098 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 GCC1Q96CN9 775 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 HMCESQ96FZ2 354 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 MSLNLQ96KJ4 702 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 FAM84BQ96KN1 310 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 COA1Q9GZY4 146 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 VPS16Q9H269 839 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 CHST8Q9H2A9 424 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 CD209Q9NNX6 404 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 PDGFCQ9NRA1 345 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 GAR1Q9NY12 217 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 COL20A1Q9P218 1284 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 STEAP1Q9UHE8 339 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 ITGB1BP2Q9UKP3 347 aa3.72□□□□□ -1.81
VPS13B-209ENST00000521559 SCAF8Q9UPN6 1271 aaKnown RBP3.72□□□□□ -1.81
VPS13B-209ENST00000521559 FRMPD2Q68DX3 1309 aaPredicted RBP3.71□□□□□ -1.81
VPS13B-209ENST00000521559 ARFGEF2Q9Y6D5 1785 aa3.71□□□□□ -1.81
VPS13B-209ENST00000521559 A0A1B0GUL7 405 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 E5RJQ4 531 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 H3BNC9 293 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 TPP1O14773 563 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 UQCRFS1P1P0C7P4 283 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 IL1R1P14778 569 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 KLRK1P26718 216 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 PEX2P28328 305 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ADORA1P30542 326 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 GYG1P46976 350 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 CARSP49589 748 aaKnown RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 DIO1P49895 249 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ITGA8P53708 1063 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 CFHR3Q02985 330 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 STK3Q13188 491 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 LARS2Q15031 903 aaKnown RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 CAVIN4Q5BKX8 364 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 GORABQ5T7V8 394 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ANKRD45Q5TZF3 282 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 DCDC5Q6ZRR9 648 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 KCTD20Q7Z5Y7 419 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 AACSQ86V21 672 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 SKAP1Q86WV1 359 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 KRT73Q86Y46 540 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 C12orf76Q8N812 135 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ZNF366Q8N895 744 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ZNF398Q8TD17 642 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 TTC17Q96AE7 1141 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 CTHRC1Q96CG8 243 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ZDHHC12Q96GR4 267 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ZBTB45Q96K62 511 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 NEUROD6Q96NK8 337 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 HIST1H2AAQ96QV6 131 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 STRBPQ96SI9 672 aaKnown RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 EFHD1Q9BUP0 239 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 LRRCC1Q9C099 1032 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 BTBD1Q9H0C5 482 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 NUP62CLQ9H1M0 184 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 DBNDD1Q9H9R9 158 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 IL1RAPL2Q9NP60 686 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 ASIC5Q9NY37 505 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 DNAJB11Q9UBS4 358 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 DKK4Q9UBT3 224 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 MID2Q9UJV3 735 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 MED23Q9ULK4 1368 aa3.71□□□□□ -1.82
VPS13B-209ENST00000521559 FNDC1Q4ZHG4 1894 aaPredicted RBP3.71□□□□□ -1.82
VPS13B-209ENST00000521559 NUP98P52948 1817 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms