RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 IQCDQ96DY2 449 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 C1orf74Q96LT6 269 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 MKRN2Q9H000 416 aaKnown RBP21.29■■□□□ 1
TRIM35-203ENST00000521253 CAPN11Q9UMQ6 739 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 MOCS3O95396 460 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 GYPCP04921 128 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 TPM3P06753 285 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 GPD1P21695 349 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 ZBED6P86452 979 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 ELF2Q15723 593 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 ARTNQ5T4W7 220 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 HGSNATQ68CP4 663 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 STRADAQ7RTN6 431 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 KIAA2013Q8IYS2 634 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 APCDD1Q8J025 514 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 FAM172AQ8WUF8 416 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 CENPIQ92674 756 aaPredicted RBP21.28■■□□□ 1
TRIM35-203ENST00000521253 SYN2Q92777 582 aaPredicted RBP21.28■■□□□ 1
TRIM35-203ENST00000521253 LOXL4Q96JB6 756 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 VCPIP1Q96JH7 1222 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 SPACA7Q96KW9 195 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 MCEEQ96PE7 176 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 HAPLN3Q96S86 360 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 PARD6AQ9NPB6 346 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 MBD1Q9UIS9 605 aaPredicted RBP21.28■■□□□ 1
TRIM35-203ENST00000521253 ITIH6Q6UXX5 1313 aa21.28■■□□□ 1
TRIM35-203ENST00000521253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 CLDN11O75508 207 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 CNTN5O94779 1100 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 RHOBTB1O94844 696 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 EPN2O95208 641 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 ASLP04424 464 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 GZMAP12544 262 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 TGM1P22735 817 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 MZF1P28698 734 aaPredicted RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 CTSOP43234 321 aaPredicted RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 NUMBP49757 651 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 HDAC4P56524 1084 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 RPL7AP62424 266 aaKnown RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 SPEM2Q0P670 501 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 ZNF177Q13360 481 aaPredicted RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 SLC12A1Q13621 1099 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 BYSLQ13895 437 aaKnown RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 ALFQ53S48 1182 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 ACBD5Q5T8D3 534 aaPredicted RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 PMS2CLQ68D20 193 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 KIAA1324Q6UXG2 1013 aaKnown RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 MYO19Q96H55 970 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 MRGPRX3Q96LB0 322 aa21.27■■□□□ 1
TRIM35-203ENST00000521253 LUC7L2Q9Y383 392 aaKnown RBP21.27■■□□□ 1
TRIM35-203ENST00000521253 IGLV3-10A0A075B6K4 115 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ANKRD62A6NC57 917 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 DRGXA6NNA5 263 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 E9PAM4 449 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ATMINO43313 823 aaPredicted RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 CBFA2T2O43439 604 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 FTLP02792 175 aaPredicted RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ADRA1BP35368 520 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ZNF143P52747 638 aaPredicted RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 COPAP53621 1224 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 CDH4P55283 916 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 MAMLD1Q13495 774 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 CAMK2GQ13555 558 aaPredicted RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 TDRD12Q587J7 1177 aaKnown RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 DCUN1D2Q6PH85 259 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 LRRC31Q6UY01 552 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 TMPRSS6Q8IU80 811 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 OR52K2Q8NGK3 314 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ARRDC1-AS1Q9H2J1 176 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 PRDM16Q9HAZ2 1276 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 CD93Q9NPY3 652 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 ERVW-1Q9UQF0 538 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 TBC1D30Q9Y2I9 924 aa21.26■□□□□ 0.99
TRIM35-203ENST00000521253 BZW2Q9Y6E2 419 aaKnown RBP21.26■□□□□ 0.99
TRIM35-203ENST00000521253 MUC22E2RYF6 1773 aaPredicted RBP21.25■□□□□ 0.99
TRIM35-203ENST00000521253 CCP110O43303 1012 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 SRGAP2O75044 1071 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 LRP3O75074 770 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 ZNF217O75362 1048 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 CASP14P31944 242 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 PLK1P53350 603 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 OXCT1P55809 520 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 ST8SIA6P61647 398 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 ECT2LQ008S8 904 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 ARL13BQ3SXY8 428 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 OR2T3Q8NH03 318 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 ALG14Q96F25 216 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 PRSS16Q9NQE7 514 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 PARVAQ9NVD7 372 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 MPP6Q9NZW5 540 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 USP18Q9UMW8 372 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 CYP8B1Q9UNU6 501 aa21.25■□□□□ 0.99
TRIM35-203ENST00000521253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRIM35-203ENST00000521253 SPAG17Q6Q759 2223 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 IGHV1OR15-9A0A0B4J2B8 117 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 MAP3K13O43283 966 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 RTN2O75298 545 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SERPING1P05155 500 aa21.24■□□□□ 0.99
TRIM35-203ENST00000521253 SRPRAP08240 638 aaKnown RBP21.24■□□□□ 0.99
TRIM35-203ENST00000521253 PLEKP08567 350 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms