RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 PRM3Q9NNZ6 103 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ENAMQ9NRM1 1142 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 DDX43Q9NXZ2 648 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ARHGAP28Q9P2N2 729 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 TLK1Q9UKI8 766 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 NME7Q9Y5B8 376 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 SCN1AP35498 2009 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 MXRA5Q9NR99 2828 aa7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 ANK3Q12955 4377 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-216ENST00000519489 FLNAP21333 2647 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 TARSL2A2RTX5 802 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 HEATR9A2RTY3 570 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 D6RAR5 112 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 F8VP50 259 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZBTB43O43298 467 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 PRPF3O43395 683 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZG16O60844 167 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 IL2RAP01589 272 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 KLKB1P03952 638 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 FURINP09958 794 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 XRCC6P12956 609 aaKnown RBP eCLIP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 LMO2P25791 158 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 CCKBRP32239 447 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 UGT1A3P35503 534 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 LEPRP48357 1165 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ADPRHP54922 357 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 PSMC1P62191 440 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 NOP14P78316 857 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 CCL7P80098 99 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 MYL7Q01449 175 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZFP36L1Q07352 338 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 RAD51AP2Q09MP3 1159 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 SPIDRQ14159 915 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 DEFB133Q30KQ1 61 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZNF776Q68DI1 518 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZCCHC8Q6NZY4 707 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZNF517Q6ZMY9 492 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 DSG4Q86SJ6 1040 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 CATSPER3Q86XQ3 398 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 SLFN12Q8IYM2 578 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 UNC5BQ8IZJ1 945 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 TMEM145Q8NBT3 493 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 ZNF548Q8NEK5 533 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 OR13H1Q8NG92 308 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 GANCQ8TET4 914 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 GTPBP3Q969Y2 492 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 MYO19Q96H55 970 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 FUBP3Q96I24 572 aaKnown RBP eCLIP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 SYNDIG1Q9H7V2 258 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 PHTF1Q9UMS5 762 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 DIDO1Q9BTC0 2240 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 PKD1L1Q8TDX9 2849 aa7.1□□□□□ -1.27
CTNNA1-216ENST00000519489 LOC101059948A0A1B0GTJ6 334 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 LRRC72A6NJI9 287 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 KPNA7A9QM74 516 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 GABRDO14764 452 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TOM1L1O75674 476 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 RNASEH2AO75792 299 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 DNAJB5O75953 348 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 ZDHHC11BP0C7U3 371 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CD1EP15812 388 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 PPP3CCP48454 512 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TAF6P49848 677 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 PEX3P56589 373 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 IFRD2Q12894 506 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 NTRK3Q16288 839 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 FNDC3BQ53EP0 1204 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 HS1BP3Q53T59 392 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 SLC45A4Q5BKX6 768 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 ZRANB3Q5FWF4 1079 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 MIIPQ5JXC2 388 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TPRG1LQ5T0D9 272 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 HECTD3Q5T447 861 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TMEM198Q66K66 360 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 SYNE3Q6ZMZ3 975 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TAOK1Q7L7X3 1001 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 ANKS1BQ7Z6G8 1248 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 TMEM135Q86UB9 458 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 ADIPOR2Q86V24 386 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 OR6B3Q8NGW1 331 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 SCAMP5Q8TAC9 235 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CCDC12Q8WUD4 166 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CCDC43Q96MW1 224 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 MYOCQ99972 504 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 BOCQ9BWV1 1114 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 RAB6BQ9NRW1 208 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CYTH4Q9UIA0 394 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 PCDHA4Q9UN74 947 aa7.09□□□□□ -1.27
CTNNA1-216ENST00000519489 CITO14578 2027 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 CCDC169A6NNP5 214 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 STMND1H3BQB6 276 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 MDM4O15151 490 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 SIN3BO75182 1162 aa7.08□□□□□ -1.28
CTNNA1-216ENST00000519489 ALPPL2P10696 532 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms