RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 TMEM145Q8NBT3 493 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 GOLGA5Q8TBA6 731 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 GANCQ8TET4 914 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 TMA16Q96EY4 203 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 INTS4Q96HW7 963 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 PRICKLE1Q96MT3 831 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 OMDQ99983 421 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 UBXN6Q9BZV1 441 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 STARD5Q9NSY2 213 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 CYTH4Q9UIA0 394 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 INTS6Q9UL03 887 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 PCDHGA8Q9Y5G5 932 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 HEMK1Q9Y5R4 338 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 U3KQA8 63 aa8.72□□□□□ -1.01
CTNNA1-215ENST00000519309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 RIOK3O14730 519 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 IKBKBO14920 756 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PLRG1O43660 514 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 HLA-DRAP01903 254 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 SRPRAP08240 638 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PDCP20941 246 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 DGKAP23743 735 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 MZF1P28698 734 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 CSKP41240 450 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PIK3CAP42336 1068 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PSMD8P48556 350 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 NFATC3Q12968 1075 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 CLN3Q13286 438 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PKP1Q13835 747 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 ELAVL3Q14576 367 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 ISXQ2M1V0 245 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 HS1BP3Q53T59 392 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PIK3R6Q5UE93 754 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 MSANTD2Q6P1R3 559 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 ZNF574Q6ZN55 896 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 UNC13DQ70J99 1090 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 MMAAQ8IVH4 418 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 MFN1Q8IWA4 741 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 HJURPQ8NCD3 748 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 FIBINQ8TAL6 211 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 TMC2Q8TDI7 906 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 PRR11Q96HE9 360 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 SLC46A1Q96NT5 459 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 FAM129BQ96TA1 746 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 IMPG2Q9BZV3 1241 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 TRIM4Q9C037 500 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 FAM117AQ9C073 453 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 APOBEC3GQ9HC16 384 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 DMAC2Q9NW81 257 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 NLGN3Q9NZ94 848 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 ANKMY1Q9P2S6 941 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 SATB2Q9UPW6 733 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-215ENST00000519309 RELNP78509 3460 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 MSI1O43347 362 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 RNGTTO60942 597 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 PIAS2O75928 621 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ZBED1O96006 694 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ITGB2P05107 769 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 SLC6A4P31645 630 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 DLG4P78352 724 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 KNOP1Q1ED39 458 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ARL13BQ3SXY8 428 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 SETMARQ53H47 684 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 C3orf38Q5JPI3 329 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 C1orf220Q5T0J3 134 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 NUGGCQ68CJ6 796 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ARHGAP17Q68EM7 881 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 CCDC81Q6ZN84 652 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ATG14Q6ZNE5 492 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 PRPF39Q86UA1 669 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 SCML4Q8N228 414 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 PDILTQ8N807 584 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 EXD3Q8N9H8 876 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 OR14C36Q8NHC7 312 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 SNX21Q969T3 373 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 IFT43Q96FT9 208 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 FAXDC2Q96IV6 333 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 APOLD1Q96LR9 279 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 C7orf25Q9BPX7 421 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 PANK2Q9BZ23 570 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ULBP1Q9BZM6 244 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 DNAI2Q9GZS0 605 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 MAGEF1Q9HAY2 307 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 IGSF5Q9NSI5 407 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 EVA1BQ9NVM1 165 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 KLHL11Q9NVR0 708 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 UCKL1Q9NWZ5 548 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 ERVW-1Q9UQF0 538 aa8.7□□□□□ -1.02
CTNNA1-215ENST00000519309 CLEC18AA5D8T8 446 aa8.69□□□□□ -1.02
CTNNA1-215ENST00000519309 TTC34A8MYJ7 566 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms