RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 CLN3Q13286 438 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 BIRC3Q13489 604 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 NCOA4Q13772 614 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 STAT4Q14765 748 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ARID5BQ14865 1188 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 TRIP4Q15650 581 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ISXQ2M1V0 245 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ZSCAN23Q3MJ62 389 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 LINC00303Q3SY05 128 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 C3orf38Q5JPI3 329 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 MMAAQ8IVH4 418 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 CCDC65Q8IXS2 484 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ARL14Q8N4G2 192 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 C12orf29Q8N999 325 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 KDM1BQ8NB78 822 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 XXYLT1Q8NBI6 393 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 MAPK15Q8TD08 544 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 EPSTI1Q96J88 318 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 SEMA3CQ99985 751 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 DNAI2Q9GZS0 605 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 AGPAT3Q9NRZ7 376 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ATXN7L1Q9ULK2 861 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 DMTF1Q9Y222 760 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 USP3Q9Y6I4 520 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 COL12A1Q99715 3063 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
CTNNA1-214ENST00000519116 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3KA0A087X1G2 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 EDDM13A0A1B0GTR0 161 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3FA6NER0 549 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 EIF3DO15371 548 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 FFAR2O15552 330 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 RPN1P04843 607 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 ITGB6P18564 788 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 C5AR1P21730 350 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 PSMD8P48556 350 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 CYP2J2P51589 502 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 NFKB2Q00653 900 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 EHHADHQ08426 723 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 SGSM1Q2NKQ1 1148 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 C4orf17Q53FE4 359 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 MPP7Q5T2T1 576 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 ADGRF1Q5T601 910 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 C9orf64Q5T6V5 341 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3GQ6DHY5 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 CCDC73Q6ZRK6 1079 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 USP53Q70EK8 1073 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 CLEC14AQ86T13 490 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 ZC3H3Q8IXZ2 948 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TPCN2Q8NHX9 752 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TAF4BQ92750 862 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 TTC17Q96AE7 1141 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 SGF29Q96ES7 293 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 CYFIP2Q96F07 1278 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 OSBPL2Q9H1P3 480 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 KDM4CQ9H3R0 1056 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 OLA1Q9NTK5 396 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 NLGN3Q9NZ94 848 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 NCKIPSDQ9NZQ3 722 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 HMGXB4Q9UGU5 601 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 STOML2Q9UJZ1 356 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 HBS1LQ9Y450 684 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 PIEZO2Q9H5I5 2752 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 UBE4BO95155 1302 aa6.71□□□□□ -1.34
CTNNA1-214ENST00000519116 MYO18AQ92614 2054 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 PTPN13Q12923 2485 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 KNL1Q8NG31 2342 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 A0A1W2PNU3 283 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 NEMP2A6NFY4 417 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 ENO4A6NNW6 628 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 PRAMEF26H0Y7S4 382 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 SLC7A4O43246 635 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 EFSO43281 561 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 TGFB1I1O43294 461 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 RNGTTO60942 597 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 PPFIA2O75334 1257 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 TNFSF15O95150 251 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 KIF20AO95235 890 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 CD70P32970 193 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 HOXD13P35453 343 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 CSKP41240 450 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 AFMP43652 599 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 MMP16P51512 607 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 YWHAGP61981 247 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 PPP2CBP62714 309 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 PPP2CAP67775 309 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 TLE1Q04724 770 aa6.7□□□□□ -1.34
CTNNA1-214ENST00000519116 INCA1Q0VD86 236 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms