RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 AGO1Q9UL18 857 aaKnown RBP7.85□□□□□ -1.15
SDCBP-206ENST00000519115 TFR2Q9UP52 801 aa7.85□□□□□ -1.15
SDCBP-206ENST00000519115 SDK1Q7Z5N4 2213 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DOCK4Q8N1I0 1966 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 PGRMC1O00264 195 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 IRAK2O43187 625 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 LAMTOR5O43504 91 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 CACNG3O60359 315 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TSPAN3O60637 253 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 RNF40O75150 1001 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TULP3O75386 442 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DAB1O75553 588 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 GJB6O95452 261 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TRUB2O95900 331 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 FTCDO95954 541 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 IGLV3-27P01718 113 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 GPD1P21695 349 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DRD1P21728 446 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 HOXC13P31276 330 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 SDC4P31431 198 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 HTR7P34969 479 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 MAGEA9P43362 315 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 PTPN5P54829 565 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DRG2P55039 364 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 RPL7AP62424 266 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 SATB1Q01826 763 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 NNTQ13423 1086 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 PDK2Q15119 407 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 CYP1B1Q16678 543 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 CCDC181Q5TID7 509 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 NUGGCQ68CJ6 796 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 RFWD3Q6PCD5 774 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DRICH1Q6PGQ1 229 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TSSK4Q6SA08 328 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 MAATS1Q7Z4T9 603 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 ETFBKMTQ8IXQ9 262 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 SPATA4Q8NEY3 305 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 UBXN4Q92575 508 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 SERPINB11Q96P15 392 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 MCEEQ96PE7 176 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 PNKPQ96T60 521 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 PRRX2Q99811 253 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 FAM129AQ9BZQ8 928 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 ZDHHC4Q9NPG8 344 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 ARHGEF4Q9NR80 690 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 METTL5Q9NRN9 209 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DNAJC17Q9NVM6 304 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 DDIT4Q9NX09 232 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 RCOR3Q9P2K3 495 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 XPO7Q9UIA9 1087 aaKnown RBP7.84□□□□□ -1.15
SDCBP-206ENST00000519115 STAP1Q9ULZ2 295 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 TLR6Q9Y2C9 796 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF510Q9Y2H8 683 aa7.84□□□□□ -1.15
SDCBP-206ENST00000519115 NYNRINQ9P2P1 1898 aaKnown RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 RALGAPA1Q6GYQ0 2036 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 GOLGA6L10A0A0M3HER8 536 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 GOLGA6L7A0A1B0GV03 622 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 K7EQS6 105 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 NDC80O14777 642 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 ACSL4O60488 711 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 LRCH4O75427 683 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 KAT7O95251 611 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 IGLV3-25P01717 112 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 APOEP02649 317 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 APODP05090 189 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 PSMA2P25787 234 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SLC6A4P31645 630 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 GBP1P32455 592 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CHKAP35790 457 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 FLT3P36888 993 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 PLA2G5P39877 138 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 EIF2DP41214 584 aaKnown RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 HCAR3P49019 387 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SULT1E1P49888 294 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SGSHP51688 502 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 NHLH1Q02575 133 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 LMNB2Q03252 620 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 CSTF1Q05048 431 aaKnown RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 RING1Q06587 406 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 NME3Q13232 169 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 EIF4EBP2Q13542 120 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 C2orf27AQ580R0 203 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 FAM133BQ5BKY9 247 aaKnown RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SEL1L2Q5TEA6 688 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 EMC10Q5UCC4 262 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 OTUD1Q5VV17 481 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 FYB2Q5VWT5 728 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 NADSYN1Q6IA69 706 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 GRAMD4Q6IC98 578 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 TRNP1Q6NT89 227 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 SYDE1Q6ZW31 735 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 DNAAF5Q86Y56 855 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 UNC45BQ8IWX7 931 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 FAM217AQ8IXS0 508 aa7.83□□□□□ -1.16
SDCBP-206ENST00000519115 MAML2Q8IZL2 1156 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-206ENST00000519115 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms