RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 BEST2Q8NFU1 509 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 STMN2Q93045 179 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 PGBD4Q96DM1 585 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 ATXN7L3BQ96GX2 97 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 HSFY1Q96LI6 401 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 ZNF184Q99676 751 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 GCOM2Q9BZD3 368 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 WDR6Q9NNW5 1121 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 MAN1C1Q9NR34 630 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 XPO1O14980 1071 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 ZMPSTE24O75844 475 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 SERPINE1P05121 402 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 PTPN3P26045 913 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 PEX19P40855 299 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 CSRP3P50461 194 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 CACNA2D1P54289 1103 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 SEMA3BQ13214 749 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 KCTD11Q693B1 232 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 FSTL4Q6MZW2 842 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 FRMD7Q6ZUT3 714 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 CATSPER4Q7RTX7 472 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 GPRIN1Q7Z2K8 1008 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 CLEC14AQ86T13 490 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 LMNTD2Q8IXW0 634 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 B3GALNT2Q8NCR0 500 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 ZNF483Q8TF39 744 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 DPF3Q92784 378 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 CERS2Q96G23 380 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 DDX50Q9BQ39 737 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 IGSF9Q9P2J2 1179 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 DCDC2Q9UHG0 476 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 SOX13Q9UN79 622 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 RPS6KL1Q9Y6S9 549 aa8.67□□□□□ -1.02
CTNNA1-210ENST00000518825 ENO4A6NNW6 628 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SBK3P0C264 359 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ARL4AP40617 200 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CCR10P46092 362 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 LILRA4P59901 499 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 NME3Q13232 169 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ITGA9Q13797 1035 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DBN1Q16643 649 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TRMT5Q32P41 509 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SLC9B1Q4ZJI4 515 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 C1orf146Q5VVC0 180 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CLEC20AQ6ZU45 233 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TMEM135Q86UB9 458 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 RASSF3Q86WH2 238 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ZNF781Q8N8C0 355 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CCNYQ8ND76 341 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 PYDC1Q8WXC3 89 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 FAM149B1Q96BN6 582 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 MFSD3Q96ES6 412 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ZNF419Q96HQ0 510 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 AGAP3Q96P47 875 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SLC2A13Q96QE2 648 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TTC1Q99614 292 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 MLPHQ9BV36 600 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DUSP16Q9BY84 665 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 RCOR3Q9P2K3 495 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ADAMTS6Q9UKP5 1117 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 M0QYT0 321 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DAB1O75553 588 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 PDE5AO76074 875 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 LTFP02788 710 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DARSP14868 501 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CRABP2P29373 138 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ABCE1P61221 599 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ZBTB17Q13105 803 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 RBBP8Q99708 897 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SNX10Q9Y5X0 201 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 NUP205Q92621 2012 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TRIP12Q14669 1992 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 YJEFN3A6XGL0 299 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 RALBP11234 206 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ITGAXP20702 1163 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 AFF1P51825 1210 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CDC16Q13042 620 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 TBCCQ15814 346 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DNAL1Q4LDG9 190 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 EFHC1Q5JVL4 640 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 CERCAMQ5T4B2 595 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 IZUMO2Q6UXV1 221 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 FASTKD5Q7L8L6 764 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 BHLHA9Q7RTU4 235 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 WDR75Q8IWA0 830 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SMG8Q8ND04 991 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 LENG1Q96BZ8 264 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 HNRNPABQ99729 332 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 DNAJC28Q9NX36 388 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 UBQLN1Q9UMX0 589 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SORCS3Q9UPU3 1222 aa8.66□□□□□ -1.02
CTNNA1-210ENST00000518825 SF3B1O75533 1304 aaKnown RBP eCLIP8.65□□□□□ -1.024e-6■■■■■ 86.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms