RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 RFWD3Q6PCD5 774 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 TMCO3Q6UWJ1 677 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 MFSD7Q6UXD7 560 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 SPOCD1Q6ZMY3 1216 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 TPGS1Q6ZTW0 290 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 NLRP14Q86W24 1093 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 CPNE8Q86YQ8 564 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLN8-203ENST00000518780 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLN8-203ENST00000518780 TTC13Q8NBP0 860 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 WFIKKN2Q8TEU8 576 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 IGSF8Q969P0 613 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 ASIC4Q96FT7 647 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 PRICKLE1Q96MT3 831 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 NAP1L3Q99457 506 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 TUBB2BQ9BVA1 445 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 OSBPL8Q9BZF1 889 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 BRD8Q9H0E9 1235 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 MAGEH1Q9H213 219 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 TMPRSS4Q9NRS4 437 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 GPATCH2LQ9NWQ4 482 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 KIAA1522Q9P206 1035 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 DEC1Q9P2X7 70 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 WNT16Q9UBV4 365 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 TTC7AQ9ULT0 858 aaPredicted RBP9.75□□□□□ -0.85
CLN8-203ENST00000518780 SNX12Q9UMY4 172 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 DUSP12Q9UNI6 340 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 NEU3Q9UQ49 428 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 ANAPC1Q9H1A4 1944 aa9.75□□□□□ -0.85
CLN8-203ENST00000518780 hCG_1818297A0A087WSY0 165 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 A0A0A0MRY4 1105 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 APOL1O14791 398 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 DCLK1O15075 740 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 ASGR2P07307 311 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 PYGMP11217 842 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 MX2P20592 715 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 TGM2P21980 687 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 CASQ1P31415 396 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 GJA4P35212 333 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 PRKCQQ04759 706 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ZNF33AQ06730 810 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 TNK2Q07912 1038 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 PAFAH1B3Q15102 231 aaKnown RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 PARP15Q460N3 678 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 SLC9A4Q6AI14 798 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 TRIM68Q6AZZ1 485 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 BBS12Q6ZW61 710 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 KIAA0907Q7Z7F0 614 aaPredicted RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 RNF135Q8IUD6 432 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 CCDC50Q8IVM0 306 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 MFN1Q8IWA4 741 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ETFBKMTQ8IXQ9 262 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 C17orf53Q8N3J3 647 aaPredicted RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 PCDH19Q8TAB3 1148 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 SHDQ96IW2 340 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ZFYVE19Q96K21 471 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 WDR24Q96S15 920 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 NELL2Q99435 816 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 HOMER3Q9NSC5 361 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 GTSE1Q9NYZ3 720 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 MPP6Q9NZW5 540 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 ZNF212Q9UDV6 495 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 DNAI1Q9UI46 699 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 PACSIN2Q9UNF0 486 aaPredicted RBP9.74□□□□□ -0.85
CLN8-203ENST00000518780 SAR1BQ9Y6B6 198 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 OBSL1O75147 1896 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 DENND4CQ5VZ89 1909 aa9.74□□□□□ -0.85
CLN8-203ENST00000518780 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 NUP210Q8TEM1 1887 aaPredicted RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 ZSCAN5CA6NGD5 496 aaPredicted RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 ESPNB1AK53 854 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 PI4K2BG5E9Z4 385 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 ENC1O14682 589 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 TRDMT1O14717 391 aaKnown RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 SCAMP3O14828 347 aaKnown RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 NPC1O15118 1278 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 RAMP2O60895 175 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 CNTN5O94779 1100 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 ATP1A1P05023 1023 aaKnown RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 CD48P09326 243 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 CISD3P0C7P0 127 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 AMPD1P23109 780 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 GRIA2P42262 883 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 MARCKSL1P49006 195 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 DGKGP49619 791 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 VCPP55072 806 aaKnown RBP9.73□□□□□ -0.85
CLN8-203ENST00000518780 SULT2A1Q06520 285 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 SLC20A2Q08357 652 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 SLC44A4Q53GD3 710 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 ALFQ53S48 1182 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
CLN8-203ENST00000518780 AFMIDQ63HM1 303 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms