RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 SND1Q7KZF4 910 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 FAM186BQ8IYM0 893 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 CEP57L1Q8IYX8 460 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 CCDC150Q8NCX0 1101 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 OR14C36Q8NHC7 312 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 NAF1Q96HR8 494 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 LGMNQ99538 433 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 CPNE5Q9HCH3 593 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 FAM13BQ9NYF5 915 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 ARHGAP20Q9P2F6 1191 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 SLCO3A1Q9UIG8 710 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 ERVW-1Q9UQF0 538 aa11.77□□□□□ -0.53
CTNNA1-205ENST00000517904 UBR5O95071 2799 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 PTPN13Q12923 2485 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 PYCARD-AS1I3L0S3 204 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 TRIM38O00635 465 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 IRAK2O43187 625 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 SIGLEC6O43699 453 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 ACSL4O60488 711 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 GABBR2O75899 941 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 KRT13P13646 458 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 ME1P48163 572 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 METAP1P53582 386 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 DAOAP59103 153 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 ENPEPQ07075 957 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 BST2Q10589 180 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 NFIL3Q16649 462 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 TAF1BQ53T94 588 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 STK40Q8N2I9 435 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 SLC25A45Q8N413 288 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 OXR1Q8N573 874 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 MFSD2AQ8NA29 543 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 KDM1BQ8NB78 822 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 HJURPQ8NCD3 748 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 UBA3Q8TBC4 463 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 FAM131CQ96AQ9 280 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 FAXDC2Q96IV6 333 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 ITIH6Q6UXX5 1313 aa11.76□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3DA0A087WVF3 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3IA0A087WXS9 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3EA0A087X179 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3KA0A087X1G2 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3FA6NER0 549 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3LB9A6J9 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 PIK3R2O00459 728 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 ADH1BP00325 375 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 MT-CO3P00414 261 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 MPOP05164 745 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 SRPRAP08240 638 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3HP0C7X1 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 LCP1P13796 627 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 VAV1P15498 845 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 C5AR1P21730 350 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 MZF1P28698 734 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 SLC11A2P49281 568 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 NUMBP49757 651 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 STK19P49842 368 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 MXI1P50539 228 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 RHDQ02161 417 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 LY6DQ14210 128 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 PKDCCQ504Y2 493 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 SGO2Q562F6 1265 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 SLC45A4Q5BKX6 768 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 ARHGAP40Q5TG30 622 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 NUGGCQ68CJ6 796 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3GQ6DHY5 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3CQ6IPX1 549 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 UNC45BQ8IWX7 931 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 TBC1D3Q8IZP1 549 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 APCDD1Q8J025 514 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CFAP52Q8N1V2 620 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 SCML4Q8N228 414 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 ZNF557Q8N988 423 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CLEC4CQ8WTT0 213 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 KCTD13Q8WZ19 329 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 PTPRN2Q92932 1015 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 AZIN2Q96A70 460 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 EEF2KMTQ96G04 330 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 RPL10LQ96L21 214 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 NUCKS1Q9H1E3 243 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CAAP1Q9H8G2 361 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms