RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 WDR60Q8WVS4 1066 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 RUFY2Q8WXA3 655 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 EXTL1Q92935 676 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 JAKMIP2Q96AA8 810 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 FUBP1Q96AE4 644 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 VPS33AQ96AX1 596 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 WDYHV1Q96HA8 205 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 NR1H4Q96RI1 486 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 LBHD1Q9BQE6 289 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 PI4K2AQ9BTU6 479 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 STN1Q9H668 368 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 ERVMER34-1Q9H9K5 563 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 VEZTQ9HBM0 779 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 GALNT9Q9HCQ5 603 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 SEMA4BQ9NPR2 832 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 TRMT1Q9NXH9 659 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 A8MXE2 369 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 M0QZQ0 153 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TSPAN4O14817 238 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 IPO8O15397 1037 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 ZSCAN9O15535 394 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TRIAP1O43715 76 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SLU7O95391 586 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SPARCP09486 303 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TBXAS1P24557 533 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 RBL1P28749 1068 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CIITAP33076 1130 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 PBX1P40424 430 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SLC12A2P55011 1212 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TIRAPP58753 221 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SF3A3Q12874 501 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 EIF2B5Q13144 721 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TP53BP2Q13625 1128 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CDSNQ15517 529 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 KRTCAP3Q53RY4 240 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SFRP4Q6FHJ7 346 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CNSTQ6PJW8 725 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SLC2A7Q6PXP3 512 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CYP20A1Q6UW02 462 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 PIK3AP1Q6ZUJ8 805 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 GALNT7Q86SF2 657 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 LCA5Q86VQ0 697 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 CHST13Q8NET6 341 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 GABPB2Q8TAK5 448 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 GDAP1Q8TB36 358 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 MYCBPAPQ8TBZ2 947 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 OSCP1Q8WVF1 389 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 GLG1Q92896 1179 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 ELP4Q96EB1 424 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 LENG8Q96PV6 779 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 PIGSQ96S52 555 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 ABHD1Q96SE0 405 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 HGH1Q9BTY7 390 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 BDH2Q9BUT1 245 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TPSD1Q9BZJ3 242 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TAOK3Q9H2K8 898 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 OPA3Q9H6K4 179 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 INTS13Q9NVM9 706 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 SLC25A10Q9UBX3 287 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 TBK1Q9UHD2 729 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 RCE1Q9Y256 329 aa6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-202ENST00000517533 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 GAGE12HA6NDE8 117 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 SAC3D1A6NKF1 404 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 TMEM200CA6NKL6 621 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 CPLX1O14810 134 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 FMO6PO60774 539 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 CDKL5O76039 1030 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 PDE8BO95263 885 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 HLA-DOAP06340 250 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 DDX6P26196 483 aaKnown RBP eCLIP6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ITPKBP27987 946 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 LIPAP38571 399 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 TXKP42681 527 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 SELENOPP49908 381 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 SATB1Q01826 763 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ACOX1Q15067 660 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 SF3B3Q15393 1217 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ZNF674Q2M3X9 581 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 CBWD5Q5RIA9 395 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 UBAP2Q5T6F2 1119 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 GALNT17Q6IS24 598 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 GRHL2Q6ISB3 625 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 DPY19L3Q6ZPD9 716 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 BTN2A1Q7KYR7 527 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 MCM10Q7L590 875 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ZNF804AQ7Z570 1209 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 LINC00346Q8IVM7 164 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 THNSL1Q8IYQ7 743 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 SUPT20HQ8NEM7 779 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ASB10Q8WXI3 467 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 PGAP3Q96FM1 320 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 LOXL4Q96JB6 756 aa6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 ZNF668Q96K58 619 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-202ENST00000517533 PIP5K1AQ99755 562 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms