RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CPA6Q8N4T0 437 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 NPWQ8N729 165 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 TRIM58Q8NG06 486 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 DDI1Q8WTU0 396 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 RNF25Q96BH1 459 aaPredicted RBP10.18□□□□□ -0.78
CLN8-202ENST00000517514 TBC1D31Q96DN5 1066 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 ZYG11BQ9C0D3 744 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 ARHGEF4Q9NR80 690 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 TMEM248Q9NWD8 314 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 TBC1D30Q9Y2I9 924 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 OR51B4Q9Y5P0 310 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 NCOR1O75376 2440 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 F5P12259 2224 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 TECTAO75443 2155 aa10.18□□□□□ -0.78
CLN8-202ENST00000517514 hCG_1818297A0A087WSY0 165 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 A0A1B0GVM2 712 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 LRRD1A4D1F6 860 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 GOLGA6L9A6NEM1 432 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 TCAF2A6NFQ2 919 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ENC1O14682 589 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ADH1CP00326 375 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 KRT10P13645 584 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 EPHB2P29323 1055 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 HLA-FP30511 346 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 CD70P32970 193 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 CDH4P55283 916 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 TPI1P60174 286 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 LMAN2Q12907 356 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 PDK2Q15119 407 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 SLC44A4Q53GD3 710 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 RABGAP1LQ5R372 815 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ACBD5Q5T8D3 534 aaPredicted RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 AFMIDQ63HM1 303 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 NCBP2-AS2Q69YL0 99 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 RWDD4Q6NW29 188 aaKnown RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 LRRC31Q6UY01 552 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 SPOCD1Q6ZMY3 1216 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 TFAP2DQ7Z6R9 452 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 VSIG1Q86XK7 387 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ARHGAP12Q8IWW6 846 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLN8-202ENST00000517514 RTL3Q8N8U3 475 aaKnown RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 KCTD6Q8NC69 237 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 EXD1Q8NHP7 514 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 FIBINQ8TAL6 211 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 RNF157Q96PX1 679 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 UHRF1Q96T88 793 aaPredicted RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 PSMB7Q99436 277 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 EPAS1Q99814 870 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 ZNF670Q9BS34 389 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 DDX56Q9NY93 547 aaKnown RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 RCOR3Q9P2K3 495 aaPredicted RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 PIAS3Q9Y6X2 628 aa10.17□□□□□ -0.78
CLN8-202ENST00000517514 MYO18AQ92614 2054 aaKnown RBP10.17□□□□□ -0.78
CLN8-202ENST00000517514 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 A0A0D9SEW6 157 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 TCRBV7S2A1N4TA0A589 114 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 MIF4GDA9UHW6 222 aaKnown RBP10.16□□□□□ -0.78
CLN8-202ENST00000517514 PRRT4C9JH25 899 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 H3BRJ5 948 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 CLDN11O75508 207 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 ZRANB2O95218 330 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLN8-202ENST00000517514 CD72P21854 359 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 HTR7P34969 479 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 PTPN7P35236 360 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 NUMBP49757 651 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 DNA2P51530 1060 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 GALK1P51570 392 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 RWDD2BP57060 319 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 GNG11P61952 73 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 ZXDAP98168 799 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 PFKPQ01813 784 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 SLC10A2Q12908 348 aaPredicted RBP10.16□□□□□ -0.78
CLN8-202ENST00000517514 FZD5Q13467 585 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 KRT81Q14533 505 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 PAFAH1B3Q15102 231 aaKnown RBP10.16□□□□□ -0.78
CLN8-202ENST00000517514 RPS6KA1Q15418 735 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 FUT11Q495W5 492 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 TTC39BQ5VTQ0 682 aaPredicted RBP10.16□□□□□ -0.78
CLN8-202ENST00000517514 SLC9A4Q6AI14 798 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 FSTL4Q6MZW2 842 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 ADIPOR2Q86V24 386 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 APCDD1Q8J025 514 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 CARNMT1Q8N4J0 409 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 PLD5Q8N7P1 536 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 CSGALNACT1Q8TDX6 532 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 TRIM44Q96DX7 344 aaPredicted RBP10.16□□□□□ -0.78
CLN8-202ENST00000517514 ALS2CR12Q96Q35 445 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 CALN1Q9BXU9 219 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 SLC2A11Q9BYW1 496 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 LRRC19Q9H756 370 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 ABCB8Q9NUT2 735 aa10.16□□□□□ -0.78
CLN8-202ENST00000517514 DNAJC17Q9NVM6 304 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms