RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PIK3R1P27986 724 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 CD34P28906 385 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 PCSK1P29120 753 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 AXLP30530 894 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 CIITAP33076 1130 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 SOX5P35711 763 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 DIO1P49895 249 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 LIG4P49917 911 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 BMXP51813 675 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 C3AR1Q16581 482 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 ATP2B3Q16720 1220 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 XKR9Q5GH70 373 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 SFRP4Q6FHJ7 346 aaPredicted RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 IRGCQ6NXR0 463 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 CCBE1Q6UXH8 406 aaPredicted RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 BAIAP2L2Q6UXY1 529 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 Q6ZVL8 140 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 TFAP2DQ7Z6R9 452 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 DSG4Q86SJ6 1040 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZC3H3Q8IXZ2 948 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 KLHDC9Q8NEP7 349 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 RIN2Q8WYP3 895 aaPredicted RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 CELF1Q92879 486 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 PRR11Q96HE9 360 aaPredicted RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 DUSP9Q99956 384 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 C1orf43Q9BWL3 253 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 POLDIP3Q9BY77 421 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 SLC39A8Q9C0K1 460 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 PIF1Q9H611 641 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 GAR1Q9NY12 217 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZNF180Q9UJW8 692 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 FAF1Q9UNN5 650 aaPredicted RBP-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 COQ6Q9Y2Z9 468 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 PRAG1Q86YV5 1406 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 MALRD1Q5VYJ5 2156 aa-0.91□□□□□ -2.56
SNORA40.16-201ENST00000517238 TENM4Q6N022 2769 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 IGKV2D-24A0A075B6R9 120 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TMEM88BA6NKF7 163 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZNF878C9JN71 531 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 RHODO00212 210 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ELL2O00472 640 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 DVL1O14640 695 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PRODHO43272 600 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 GPR32O75388 356 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 P4HBP07237 508 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 CGB3P0DN86 165 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PAX1P15863 534 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 NAT1P18440 290 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 COL8A2P25067 703 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 GDF1P27539 372 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 MAP2K2P36507 400 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 DVL1P1P54792 670 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 EIF6P56537 245 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 IFRD2Q12894 506 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ELAVL2Q12926 359 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 LY6EQ16553 131 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 EIPR1Q53HC9 387 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 FASTKD1Q53R41 847 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 GRHL2Q6ISB3 625 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TMEM108Q6UXF1 575 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PTCHD4Q6ZW05 846 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 SPATC1Q76KD6 591 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 KRTAP19-3Q7Z4W3 81 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 VASH2Q86V25 355 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 CAND1Q86VP6 1230 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TMEM61Q8N0U2 210 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 RTF1Q92541 710 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TM9SF4Q92544 642 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ESAMQ96AP7 390 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PBXIP1Q96AQ6 731 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 CYFIP2Q96F07 1278 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 SIPA1Q96FS4 1042 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TXNDC15Q96J42 360 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZNF583Q96ND8 569 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 NPAS1Q99742 590 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 TINF2Q9BSI4 451 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 MAGEH1Q9H213 219 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 PANK3Q9H999 370 aa-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 AGO4Q9HCK5 861 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 BIN2Q9UBW5 565 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 ARMCX3Q9UH62 379 aaPredicted RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 AGO1Q9UL18 857 aaKnown RBP-0.92□□□□□ -2.56
SNORA40.16-201ENST00000517238 A0A0G2JLW4 131 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 A0A1W2PPR1 153 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZNF785A8K8V0 405 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 E9PLN8 166 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 DVL2O14641 736 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 TBX3O15119 743 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 VPS4BO75351 444 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 FOLR2P14207 255 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 ZNF823P16415 610 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 MDKP21741 143 aaPredicted RBP-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 LPOP22079 712 aaPredicted RBP-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 MCM3P25205 808 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 IL15P40933 162 aaPredicted RBP-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 SLC6A12P48065 614 aa-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 GCLCP48506 637 aaPredicted RBP-0.93□□□□□ -2.56
SNORA40.16-201ENST00000517238 LOXL3P58215 753 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms