RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 VAV1P15498 845 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 LAG3P18627 525 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 CCNCP24863 283 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 EPHB2P29323 1055 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 PBX3P40426 434 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 PPP3CCP48454 512 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 LMAN1P49257 510 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 KCNQ1P51787 676 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 GPX6P59796 221 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 DMTNQ08495 405 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 KLHL38Q2WGJ6 581 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 TMEM31Q5JXX7 168 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 AFMIDQ63HM1 303 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ZNF449Q6P9G9 518 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 RNF19BQ6ZMZ0 732 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ARHGEF18Q6ZSZ5 1173 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 C3orf62Q6ZUJ4 267 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 TAS1R1Q7RTX1 841 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 EXOC3L1Q86VI1 746 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 CAND1Q86VP6 1230 aaKnown RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 PALM2Q8IXS6 379 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ZNF683Q8IZ20 524 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ZNF461Q8TAF7 563 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 CCDC110Q8TBZ0 833 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 BCL7CQ8WUZ0 217 aaPredicted RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 RNF34Q969K3 372 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 FBXO32Q969P5 355 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 AZIN2Q96A70 460 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 FCRL2Q96LA5 508 aaPredicted RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 MYRFLQ96LU7 910 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 ZNF558Q96NG5 402 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 PPP1R2P1Q96PQ5 205 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 NAT9Q9BTE0 207 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 LRFN3Q9BTN0 628 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 DHRS4Q9BTZ2 278 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 HERC2P3Q9BVR0 1158 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 CENPHQ9H3R5 247 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 CCDC134Q9H6E4 229 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 OSER1Q9NX31 292 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 BCCIPQ9P287 314 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNF8-214ENST00000515174 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 NEU3Q9UQ49 428 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 HBS1LQ9Y450 684 aaKnown RBP10.49□□□□□ -0.73
SNF8-214ENST00000515174 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 CLUHO75153 1309 aa10.49□□□□□ -0.73
SNF8-214ENST00000515174 GREB1Q4ZG55 1949 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 WDR27A2RRH5 827 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 DRGXA6NNA5 263 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 NT5C1B-RDH14C9J2C7 533 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 AP3B1O00203 1094 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 SUN1O94901 812 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 IFNAR2P48551 515 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 PGFP49763 221 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 TBX4P57082 545 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 USP46P62068 366 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 IFI35P80217 286 aaPredicted RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 TAF10Q12962 218 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 DUSP4Q13115 394 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 RAB33AQ14088 237 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 FASTKD3Q14CZ7 662 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 PSMD5Q16401 504 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 LONRF1Q17RB8 773 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 C5orf22Q49AR2 442 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 TEX44Q53QW1 395 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 ADGRD1Q6QNK2 874 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 DDX53Q86TM3 631 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 ATP6V0D2Q8N8Y2 350 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 FBXO36Q8NEA4 188 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 ARHGEF2Q92974 986 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 BTN2A3PQ96KV6 586 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 SIGLEC10Q96LC7 697 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 CYTH2Q99418 400 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 LGMNQ99538 433 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 EPHX3Q9H6B9 360 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 SSU72Q9NP77 194 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNF8-214ENST00000515174 DNAJC17Q9NVM6 304 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 SPG21Q9NZD8 308 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 GMIPQ9P107 970 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
SNF8-214ENST00000515174 ZNF638Q14966 1978 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 TCF20Q9UGU0 1960 aaKnown RBP10.48□□□□□ -0.73
SNF8-214ENST00000515174 OBSL1O75147 1896 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 EXOC1LA0A1B0GW35 172 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 RNF103O00237 685 aa10.47□□□□□ -0.73
SNF8-214ENST00000515174 APRTP07741 180 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms