RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 TM7SF3Q9NS93 570 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 DDIT4Q9NX09 232 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 PCDHGC3Q9UN70 934 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 NEUROG3Q9Y4Z2 214 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 SNX11Q9Y5W9 270 aa13.76□□□□□ -0.21
PFDN1-206ENST00000514611 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 HSF2BPO75031 334 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 CBFA2T3O75081 653 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 MOCS3O95396 460 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 SRPRAP08240 638 aaKnown RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 VAV1P15498 845 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 MZF1P28698 734 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 PSMD8P48556 350 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 IRAK1P51617 712 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 ECT2LQ008S8 904 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 CST6Q15828 149 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 TPD52L1Q16890 204 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 OR6B2Q6IFH4 312 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 OLFML1Q6UWY5 402 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 RAB44Q7Z6P3 723 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 MLKLQ8NB16 471 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 GANCQ8TET4 914 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 FBXL12Q9NXK8 326 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 SLCO3A1Q9UIG8 710 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
PFDN1-206ENST00000514611 PCDHB9Q9Y5E1 797 aa13.75□□□□□ -0.21
PFDN1-206ENST00000514611 CACNA1EQ15878 2313 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 KCNK3O14649 394 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 DAB1O75553 588 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 RNASEH2AO75792 299 aaKnown RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 TRIM16O95361 564 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 GLI1P08151 1106 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ABCB4P21439 1286 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CD27P26842 260 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CCR1P32246 355 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CLCN1P35523 988 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 GRIA4P48058 902 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CDK17Q00537 523 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 PTK2Q05397 1052 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 NME3Q13232 169 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ARID5BQ14865 1188 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 MAN2A1Q16706 1144 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ZNF423Q2M1K9 1284 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 KCNT1Q5JUK3 1230 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 RNF219Q5W0B1 726 aaPredicted RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 KIAA0895LQ68EN5 471 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 NCEH1Q6PIU2 408 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 USP30Q70CQ3 517 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 STK40Q8N2I9 435 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 AADATQ8N5Z0 425 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 KDM1BQ8NB78 822 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 OR52K2Q8NGK3 314 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ZCCHC14Q8WYQ9 949 aaKnown RBP13.74□□□□□ -0.21
PFDN1-206ENST00000514611 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 IGSF8Q969P0 613 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 SLC6A18Q96N87 628 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 CLSTN2Q9H4D0 955 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 SCML1Q9UN30 329 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 NCKAP1Q9Y2A7 1128 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 MSRB2Q9Y3D2 182 aa13.74□□□□□ -0.21
PFDN1-206ENST00000514611 NUMA1Q14980 2115 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 ZZEF1O43149 2961 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 A0A1B0GVM2 712 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
PFDN1-206ENST00000514611 TCAF2A6NFQ2 919 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 FOXN3O00409 490 aaPredicted RBP13.73□□□□□ -0.21
PFDN1-206ENST00000514611 RNASEH1O60930 286 aaKnown RBP13.73□□□□□ -0.21
PFDN1-206ENST00000514611 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
PFDN1-206ENST00000514611 METAP1P53582 386 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 GALCP54803 685 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 IL9RQ01113 521 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 TEAD4Q15561 434 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 VWA3BQ502W6 1294 aa13.73□□□□□ -0.21
PFDN1-206ENST00000514611 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms