RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	TBC1D3G	Q6DHY5	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3C	Q6IPX1	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	XRRA1	Q6P2D8	792 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	KATNAL1	Q9BW62	490 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TMEM120A	Q9BXJ8	343 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SPAG4	Q9NPE6	437 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	RNF146	Q9NTX7	359 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TRPC5	Q9UL62	973 aa	Predicted RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	COPG1	Q9Y678	874 aa	Known RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	IGKV2D-30	A0A075B6S6	120 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402		A0A087WV62	115 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A18P	A6NE21	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A16P	A6NEW6	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A9P	A6NNJ1	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A5P	A8MXJ8	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	KIF28P	B7ZC32	967 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	ALPL	P05186	524 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	HMGB1	P09429	215 aa	Known RBP	4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A15P	P0C7V4	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM90A14P	P0C7W9	464 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	CDC25A	P30304	524 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	PTGR1	Q14914	329 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	NFRKB	Q6P4R8	1299 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	PDXDC1	Q6P996	788 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	RAB11FIP2	Q7L804	512 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	PELI3	Q8N2H9	469 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	ENDOV	Q8N8Q3	282 aa	Known RBP	4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	EME1	Q96AY2	570 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	RTKN	Q9BST9	563 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	WDR12	Q9GZL7	423 aa	Known RBP	4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	HERC5	Q9UII4	1024 aa	Known RBP	4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	CDC23	Q9UJX2	597 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402	RAB21	Q9UL25	225 aa		4.65	□□□□□ -1.67
MATR3-223	ENST00000514402		A0A1W2PPC1	479 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	AQP12B	A6NM10	295 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	CHRNA5	P30532	468 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	CCKBR	P32239	447 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	HTR6	P50406	440 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	GALNT3	Q14435	633 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	SEMA3A	Q14563	771 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	GPR162	Q16538	588 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	ZACN	Q401N2	412 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	ASPHD1	Q5U4P2	390 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	ZNF549	Q6P9A3	640 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	RTL10	Q7L3V2	364 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	KDELC2	Q7Z4H8	507 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	MDGA2	Q7Z553	956 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	CCDC146	Q8IYE0	955 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	STYX	Q8WUJ0	223 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	HMGB4	Q8WW32	186 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	TMLHE	Q9NVH6	421 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
MATR3-223	ENST00000514402	DTX4	Q9Y2E6	619 aa		4.64	□□□□□ -1.67
MATR3-223	ENST00000514402		A6NNC1	897 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	LGALS16	A8MUM7	142 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	MSI1	O43347	362 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	SMAD6	O43541	496 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	CHRNB1	P11230	501 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	PCP4	P48539	62 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	RASSF2	P50749	326 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	OAZ1	P54368	228 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM3B	P58499	235 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	ICA1	Q05084	483 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	GAD2	Q05329	585 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	PFKFB4	Q16877	469 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	ALG10	Q5BKT4	473 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	ALG10B	Q5I7T1	473 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	VWA5B1	Q5TIE3	1220 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	MORC1	Q86VD1	984 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	IGFN1	Q86VF2	1251 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	KLB	Q86Z14	1044 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	FAM185A	Q8N0U4	392 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	TMEM199	Q8N511	208 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC2A12	Q8TD20	617 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	TMEM174	Q8WUU8	243 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	ADAD1	Q96M93	576 aa	Known RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	MECR	Q9BV79	373 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	AAMDC	Q9H7C9	122 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	IL21R	Q9HBE5	538 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	OBP2B	Q9NPH6	170 aa		4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.63	□□□□□ -1.67
MATR3-223	ENST00000514402	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	NEURL1	O76050	574 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	HOXB2	P14652	356 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	SERPINF1	P36955	418 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	RCAN1	P53805	252 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	P2RX3	P56373	397 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	NANOS2	P60321	138 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	AP2B1	P63010	937 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	ERV3-1	Q14264	604 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	BTBD16	Q32M84	506 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402		Q5PR19	223 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	TTC22	Q5TAA0	569 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	PARM1	Q6UWI2	310 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	CPT1B	Q92523	772 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	KAT2A	Q92830	837 aa		4.62	□□□□□ -1.67

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