RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ABCB8Q9NUT2 735 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 NDFIP2Q9NV92 336 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 OR12D3Q9UGF7 316 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 MFHAS1Q9Y4C4 1052 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 MUC22E2RYF6 1773 aaPredicted RBP10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 F5P12259 2224 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 DOCK4Q8N1I0 1966 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 ATG2BQ96BY7 2078 aa10.1□□□□□ -0.79
TOPBP1-209ENST00000513818 IGLV3-10A0A075B6K4 115 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 A0A0A6YYK5 440 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 A0A1B0GVM2 712 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TCAF2A6NFQ2 919 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 EEF2KO00418 725 aaKnown RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 MAN2B1O00754 1011 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 NRDCO43847 1150 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 RNF40O75150 1001 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 KRT1P04264 644 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 APODP05090 189 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 RHOCP08134 193 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CCDC175P0C221 793 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CHRNB1P11230 501 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 PABPC1P11940 636 aaKnown RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 GLULP15104 373 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 EPHB2P29323 1055 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 HOXC13P31276 330 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 WASP42768 502 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 DNA2P51530 1060 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 HADHBP55084 474 aaKnown RBP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TPI1P60174 286 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 GRSF1Q12849 480 aaKnown RBP eCLIP10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 MMRN1Q13201 1228 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 SEMA3BQ13214 749 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CCINQ13939 588 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 KRT81Q14533 505 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TCEAL1Q15170 157 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 LLGL1Q15334 1064 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 FUT11Q495W5 492 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 ERMARDQ5T6L9 678 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 EGFLAMQ63HQ2 1017 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 LRRC31Q6UY01 552 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 DAAM2Q86T65 1068 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TMEM105Q8N8V8 129 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CYB5D2Q8WUJ1 264 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 KRT35Q92764 455 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 PBXIP1Q96AQ6 731 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TBC1D31Q96DN5 1066 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 SHDQ96IW2 340 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 EPAS1Q99814 870 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 LMAN1LQ9HAT1 526 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 PCDH18Q9HCL0 1135 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 GGA2Q9UJY4 613 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 HCN2Q9UL51 889 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 GUCA1BQ9UMX6 200 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 PPP2R2CQ9Y2T4 447 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 CUL9Q8IWT3 2517 aa10.09□□□□□ -0.79
TOPBP1-209ENST00000513818 TBC1D3BA6NDS4 549 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 DRGXA6NNA5 263 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 BTNL10A8MVZ5 291 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 K7EQS6 105 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 PALMO75781 387 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 FTCDO95954 541 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 L1CAMP32004 1257 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 GRIA2P42262 883 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CDH4P55283 916 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CDH6P55285 790 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 AMPD2Q01433 879 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 FZD5Q13467 585 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 GAS6Q14393 721 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 ACAP1Q15027 740 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 DPYSL2Q16555 572 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 HADHQ16836 314 aaKnown RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 C5orf22Q49AR2 442 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 C2orf27AQ580R0 203 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 TTC39BQ5VTQ0 682 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 C11orf63Q6NUN7 778 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CHST9Q7L1S5 443 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 ANKS1BQ7Z6G8 1248 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 NLRP14Q86W24 1093 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 APCDD1Q8J025 514 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 OR7D4Q8NG98 312 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 RPLP0P6Q8NHW5 317 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 RAPGEF5Q92565 580 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 LMLNQ96KR4 655 aa10.08□□□□□ -0.8
TOPBP1-209ENST00000513818 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms