RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 NAF1Q96HR8 494 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 CNDP2Q96KP4 475 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 ACCSQ96QU6 501 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 KIF2CQ99661 725 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 SMOQ99835 787 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 SNX25Q9H3E2 840 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 MRPL44Q9H9J2 332 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 EBF2Q9HAK2 575 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 SLC27A6Q9Y2P4 619 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 CYP26A1O43174 497 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 TSPAN3O60637 253 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 PRPF6O94906 941 aaKnown RBP12.87□□□□□ -0.35
SDHA-215ENST00000512962 GCNT3O95395 438 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 PENKP01210 267 aaPredicted RBP12.87□□□□□ -0.35
SDHA-215ENST00000512962 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 EPHX1P07099 455 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 CCDC130P13994 396 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 OXTRP30559 389 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 DNAJA1P31689 397 aaKnown RBP12.87□□□□□ -0.35
SDHA-215ENST00000512962 HOXD13P35453 343 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 UBA7P41226 1012 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 MAP2K3P46734 347 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
SDHA-215ENST00000512962 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 HPS3Q969F9 1004 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 TMEM176AQ96HP8 235 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 SLC6A18Q96N87 628 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 NACA2Q9H009 215 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 CAAP1Q9H8G2 361 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 OSGEPQ9NPF4 335 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 ADAMTS1Q9UHI8 967 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 PCDHGA1Q9Y5H4 931 aa12.87□□□□□ -0.35
SDHA-215ENST00000512962 SPTA1P02549 2419 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 A8MXQ7 604 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 B8ZZF3 427 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 H3BM21 787 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 STC2O76061 302 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 FSBPO95073 299 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 TNNC2P02585 160 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 ABCD1P33897 745 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 HNF1BP35680 557 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 LIG3P49916 1009 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 TAF1BQ53T94 588 aaPredicted RBP12.86□□□□□ -0.35
SDHA-215ENST00000512962 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 ZC3H3Q8IXZ2 948 aaKnown RBP12.86□□□□□ -0.35
SDHA-215ENST00000512962 EID2Q8N6I1 236 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 SAP25Q8TEE9 199 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 TTC9Q92623 222 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 FGF11Q92914 225 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 AK8Q96MA6 479 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 SPON2Q9BUD6 331 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
SDHA-215ENST00000512962 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
SDHA-215ENST00000512962 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 GPN3Q9UHW5 284 aaPredicted RBP12.86□□□□□ -0.35
SDHA-215ENST00000512962 TRIM33Q9UPN9 1127 aa12.86□□□□□ -0.35
SDHA-215ENST00000512962 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
SDHA-215ENST00000512962 BSNQ9UPA5 3926 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 SYNCRIPO60506 623 aaKnown RBP12.85□□□□□ -0.35
SDHA-215ENST00000512962 PAGE1O75459 146 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 LDOC1O95751 146 aaPredicted RBP12.85□□□□□ -0.35
SDHA-215ENST00000512962 SEMA4FO95754 770 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
SDHA-215ENST00000512962 CD27P26842 260 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 MYL6P60660 151 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 WDR72Q3MJ13 1102 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 ARHGAP40Q5TG30 622 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 OR2T3Q8NH03 318 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 RHOVQ96L33 236 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 CLEC4MQ9H2X3 399 aaPredicted RBP12.85□□□□□ -0.35
SDHA-215ENST00000512962 MTG2Q9H4K7 406 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 SOX13Q9UN79 622 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 PCDHB1Q9Y5F3 818 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 DOCK9Q9BZ29 2069 aa12.85□□□□□ -0.35
SDHA-215ENST00000512962 A0A1W2PQH9 124 aa12.84□□□□□ -0.35
SDHA-215ENST00000512962 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
SDHA-215ENST00000512962 SLC26A4O43511 780 aa12.84□□□□□ -0.35
SDHA-215ENST00000512962 WISP1O95388 367 aa12.84□□□□□ -0.35
SDHA-215ENST00000512962 ACADMP11310 421 aa12.84□□□□□ -0.35
SDHA-215ENST00000512962 RPS14P62263 151 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms