RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
VEGFA-216ENST00000512683 BTN2A3PQ96KV6 586 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 MRGPRX3Q96LB0 322 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 OMDQ99983 421 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.332e-7■■■■□ 22.2
VEGFA-216ENST00000512683 STIM2Q9P246 746 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 INTS6Q9UL03 887 aaKnown RBP13.01□□□□□ -0.33
VEGFA-216ENST00000512683 ERVW-1Q9UQF0 538 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 AKAP13Q12802 2813 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 A0A087WV48 116 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 BICDL2A1A5D9 508 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 CAPN9O14815 690 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 SLC7A4O43246 635 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 LUC7L3O95232 432 aaKnown RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 APOEP02649 317 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 FYNP06241 537 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 GLI1P08151 1106 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 CD38P28907 300 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 RXRGP48443 463 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 RGS7P49802 495 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 SGSHP51688 502 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 STX17P56962 302 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 YWHAZP63104 245 aaKnown RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 ILKQ13418 452 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 CAMK2BQ13554 666 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 ELAVL3Q14576 367 aaKnown RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 DCAF6Q58WW2 860 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 TTC39BQ5VTQ0 682 aaPredicted RBP13□□□□□ -0.33
VEGFA-216ENST00000512683 PDZD3Q86UT5 571 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 IQCHQ86VS3 1027 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 CACUL1Q86Y37 369 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 ZNF366Q8N895 744 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 WFDC5Q8TCV5 224 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 KAT5Q92993 513 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 FAM129BQ96TA1 746 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 ZSWIM1Q9BR11 485 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 THAP9Q9H5L6 903 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 POPDC2Q9HBU9 364 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 GDF3Q9NR23 364 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 FTSJ1Q9UET6 329 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 BTBD3Q9Y2F9 522 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 KNL1Q8NG31 2342 aa13□□□□□ -0.33
VEGFA-216ENST00000512683 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 ACACAQ13085 2346 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 FGFR1OPO95684 399 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 SNX16P57768 344 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 UBE2HP62256 183 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 RPS24P62847 133 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 CCDC15Q0P6D6 951 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 KCNH2Q12809 1159 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 PAK1Q13153 545 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 EIF4EBP2Q13542 120 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 FAM46CQ5VWP2 391 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 NCEH1Q6PIU2 408 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 DSG4Q86SJ6 1040 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 MMAAQ8IVH4 418 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 ARHGEF19Q8IW93 802 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 ATP6V0D2Q8N8Y2 350 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 MFSD2AQ8NA29 543 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 FAM131CQ96AQ9 280 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 MIS12Q9H081 205 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 NAALADL1Q9UQQ1 740 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 SLCO1B1Q9Y6L6 691 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 SPEGQ15772 3267 aa12.99□□□□□ -0.33
VEGFA-216ENST00000512683 DSPP15924 2871 aaKnown RBP12.99□□□□□ -0.33
VEGFA-216ENST00000512683 BAHCC1Q9P281 2608 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 APC2O95996 2303 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 A0A1W2PP55 124 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 A0A1W2PR77 199 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 TLR4O00206 839 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 MID1O15344 667 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 LATO43561 262 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 RNASEH2AO75792 299 aaKnown RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 LDOC1O95751 146 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CALCAP01258 141 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 IGLV3-25P01717 112 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 ITGAVP06756 1048 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 ABCB4P21439 1286 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 HNF1BP35680 557 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CYP4F3Q08477 520 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CAMK4Q16566 473 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 FSCBQ5H9T9 825 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 ACBD5Q5T8D3 534 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 DHX40Q8IX18 779 aaKnown RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 MDM1Q8TC05 714 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms