RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CLHC1Q8NHS4 586 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PTCH1Q13635 1447 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 CLDN4O14493 209 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 SH3BGRLO75368 114 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 PRDX5P30044 214 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 COASYQ13057 564 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PIGHQ14442 188 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 TBC1D16Q8TBP0 767 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 EEF1AKMT1Q8WVE0 214 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 TMEM120AQ9BXJ8 343 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PAIP1Q9H074 479 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 PLEKHA1Q9HB21 404 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 IMP3Q9NV31 184 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 MRGBPQ9NV56 204 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RWDD2AQ9UIY3 292 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 BICRAQ9NZM4 1560 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 H0Y858 1186 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RRP8O43159 456 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 SUPT7LO94864 414 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 WEE2P0C1S8 567 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 HSD17B2P37059 387 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 ACAP1Q15027 740 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 TMED8Q6PL24 325 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 LRRC70Q7Z2Q7 622 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 ZNF717Q9BY31 904 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 WNT8AQ9H1J5 351 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 GOLPH3Q9H4A6 298 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 SNX24Q9Y343 169 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 TRAPPC8Q9Y2L5 1435 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 WDR19Q8NEZ3 1342 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 XKRYO14609 159 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PRG2P13727 222 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 SYN1P17600 705 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 OMPP47874 163 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 CHN2P52757 468 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 DRAP1Q14919 205 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 ZSWIM7Q19AV6 140 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 STAG2Q8N3U4 1231 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 SPPL2AQ8TCT8 520 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 THRSPQ92748 146 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 GPR20Q99678 358 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 DEC1Q9P2X7 70 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 DUSP10Q9Y6W6 482 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 CUL7Q14999 1698 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 H3BN98 237 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TIMM44O43615 452 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 CNOT3O75175 753 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 CATP04040 527 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 SERPINF2P08697 491 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 HNF4AP41235 474 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 PURAQ00577 322 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 SNTA1Q13424 505 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 CWF19L1Q69YN2 538 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 PYHIN1Q6K0P9 492 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 WASF3Q9UPY6 502 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 RUVBL1Q9Y265 456 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 TELO2Q9Y4R8 837 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TIMM13Q9Y5L4 95 aaPredicted RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 PLD2O14939 933 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 KLHL41O60662 606 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 RPSAP08865 295 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 CCR1P32246 355 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 AP5B1Q2VPB7 878 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 ILDR2Q71H61 639 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 BEND7Q8N7W2 519 aaPredicted RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 CPT1CQ8TCG5 803 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 CD99L2Q8TCZ2 262 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SGF29Q96ES7 293 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 LRMDAQ9H2I8 198 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TMBIM4Q9HC24 238 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TBC1D13Q9NVG8 400 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 CDH9Q9ULB4 789 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 ADM5C9JUS6 153 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 USP1O94782 785 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 MYL12AP19105 171 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 LONRF1Q17RB8 773 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 GALNT18Q6P9A2 607 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 GLT6D1Q7Z4J2 308 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 JAZF1Q86VZ6 243 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TMEM156Q8N614 296 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 KBTBD7Q8WVZ9 684 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 HMGB4Q8WW32 186 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 C2orf49Q9BVC5 232 aaPredicted RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 C11orf49Q9H6J7 331 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 XPR1Q9UBH6 696 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TRPC5OSA6NMA1 111 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 IRF6O14896 467 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms