RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 VPS45Q9NRW7 570 aa17.02■□□□□ 0.32
DDX41-213ENST00000512027 ARHGEF38Q9NXL2 777 aa17.02■□□□□ 0.32
DDX41-213ENST00000512027 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.32
DDX41-213ENST00000512027 DOCK4Q8N1I0 1966 aa17.02■□□□□ 0.31
DDX41-213ENST00000512027 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 A0A1B0GVM2 712 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 LRRC53A6NM62 1247 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 PRR5-ARHGAP8B1AHC4 643 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 ZNF217O75362 1048 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 CNTN5O94779 1100 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 NSFP46459 744 aaKnown RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 STK19P49842 368 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 ARHGAP8P85298 464 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 CAMK2GQ13555 558 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 LYSMD4Q5XG99 296 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 E4F1Q66K89 784 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 CXorf57Q6NSI4 855 aaKnown RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 FAM124AQ86V42 546 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 FAM131BQ86XD5 332 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 OR2T3Q8NH03 318 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 PRCCQ92733 491 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 PGAP3Q96FM1 320 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 RPL10LQ96L21 214 aaKnown RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 AGPAT1Q99943 283 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 PRSS16Q9NQE7 514 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 RRN3Q9NYV6 651 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 KIAA1522Q9P206 1035 aaPredicted RBP17.01■□□□□ 0.31
DDX41-213ENST00000512027 ERVW-1Q9UQF0 538 aa17.01■□□□□ 0.31
DDX41-213ENST00000512027 PI4KAP42356 2102 aa17■□□□□ 0.31
DDX41-213ENST00000512027 DCDC2BA2VCK2 349 aa17■□□□□ 0.31
DDX41-213ENST00000512027 TTC34A8MYJ7 566 aa17■□□□□ 0.31
DDX41-213ENST00000512027 AP5Z1O43299 807 aa17■□□□□ 0.31
DDX41-213ENST00000512027 SERPINC1P01008 464 aa17■□□□□ 0.31
DDX41-213ENST00000512027 TPMTP51580 245 aa17■□□□□ 0.31
DDX41-213ENST00000512027 PUM1Q14671 1186 aaKnown RBP eCLIP17■□□□□ 0.31
DDX41-213ENST00000512027 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
DDX41-213ENST00000512027 FILIP1LQ4L180 1135 aa17■□□□□ 0.31
DDX41-213ENST00000512027 ALFQ53S48 1182 aa17■□□□□ 0.31
DDX41-213ENST00000512027 BRMS1LQ5PSV4 323 aa17■□□□□ 0.31
DDX41-213ENST00000512027 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
DDX41-213ENST00000512027 BNIPLQ7Z465 357 aa17■□□□□ 0.31
DDX41-213ENST00000512027 IRF2BP2Q7Z5L9 587 aa17■□□□□ 0.31
DDX41-213ENST00000512027 DNAAF5Q86Y56 855 aa17■□□□□ 0.31
DDX41-213ENST00000512027 ZNF557Q8N988 423 aaPredicted RBP17■□□□□ 0.31
DDX41-213ENST00000512027 RXFP2Q8WXD0 754 aa17■□□□□ 0.31
DDX41-213ENST00000512027 TOE1Q96GM8 510 aaKnown RBP17■□□□□ 0.31
DDX41-213ENST00000512027 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
DDX41-213ENST00000512027 FSCN3Q9NQT6 498 aa17■□□□□ 0.31
DDX41-213ENST00000512027 TAS2R14Q9NYV8 317 aa17■□□□□ 0.31
DDX41-213ENST00000512027 ADAM22Q9P0K1 906 aa17■□□□□ 0.31
DDX41-213ENST00000512027 USP36Q9P275 1121 aaKnown RBP17■□□□□ 0.31
DDX41-213ENST00000512027 SLCO3A1Q9UIG8 710 aa17■□□□□ 0.31
DDX41-213ENST00000512027 SPTBN2O15020 2390 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 SIN3BO75182 1162 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 ASLP04424 464 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 FERP16591 822 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 RDXP35241 583 aaKnown RBP16.99■□□□□ 0.31
DDX41-213ENST00000512027 ST8SIA6P61647 398 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 ZNF33AQ06730 810 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 CCDC14Q49A88 953 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 ARTNQ5T4W7 220 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 TTC39BQ5VTQ0 682 aaPredicted RBP16.99■□□□□ 0.31
DDX41-213ENST00000512027 SLC36A4Q6YBV0 504 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 MON1BQ7L1V2 547 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 ZNF683Q8IZ20 524 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 NETO1Q8TDF5 533 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 GPR174Q9BXC1 333 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 ITM2CQ9NQX7 267 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 WSB2Q9NYS7 404 aaPredicted RBP16.99■□□□□ 0.31
DDX41-213ENST00000512027 MPP6Q9NZW5 540 aa16.99■□□□□ 0.31
DDX41-213ENST00000512027 LNP1A1A4G5 178 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 C2CD4BA6NLJ0 364 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 TMCO5BA8MYB1 307 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 NDUFS2O75306 463 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 MOCS3O95396 460 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 F9P00740 461 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 ACADMP11310 421 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 VAV1P15498 845 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 MAOBP27338 520 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 CD6P30203 668 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 RFC1P35251 1148 aaPredicted RBP16.98■□□□□ 0.31
DDX41-213ENST00000512027 RPS14P62263 151 aaKnown RBP16.98■□□□□ 0.31
DDX41-213ENST00000512027 FANCCQ00597 558 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 ECT2LQ008S8 904 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 E2F5Q15329 346 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 DGLUCYQ7Z3D6 616 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 TFAP2DQ7Z6R9 452 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 METTL3Q86U44 580 aaKnown RBP16.98■□□□□ 0.31
DDX41-213ENST00000512027 PHF13Q86YI8 300 aaPredicted RBP16.98■□□□□ 0.31
DDX41-213ENST00000512027 ALG14Q96F25 216 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 EDEM2Q9BV94 578 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 MAGEB5Q9BZ81 275 aa16.98■□□□□ 0.31
DDX41-213ENST00000512027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
DDX41-213ENST00000512027 A0A1W2PQC6 194 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 E9PAM4 449 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 SLC30A4O14863 429 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 SRGAP2O75044 1071 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms