RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 EDDM13A0A1B0GTR0 161 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
RNF4-216ENST00000511859 IRAK2O43187 625 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 SUV39H1O43463 412 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 RNGTTO60942 597 aaKnown RBP12.01□□□□□ -0.49
RNF4-216ENST00000511859 AFPP02771 609 aaKnown RBP12.01□□□□□ -0.49
RNF4-216ENST00000511859 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
RNF4-216ENST00000511859 ALPPL2P10696 532 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 ISXQ2M1V0 245 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 RAB41Q5JT25 222 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 FAM26FQ5R3K3 315 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 C6orf132Q5T0Z8 1188 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 PM20D1Q6GTS8 502 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 NELFCDQ8IXH7 590 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 AADATQ8N5Z0 425 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 TWNKQ96RR1 684 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 CCNL2Q96S94 520 aaPredicted RBP12.01□□□□□ -0.49
RNF4-216ENST00000511859 FAM129BQ96TA1 746 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF4-216ENST00000511859 OSBPL2Q9H1P3 480 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 KLHL11Q9NVR0 708 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 KBTBD4Q9NVX7 518 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
RNF4-216ENST00000511859 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
RNF4-216ENST00000511859 A0A087X0B3 334 aa12□□□□□ -0.49
RNF4-216ENST00000511859 NEMP2A6NFY4 417 aa12□□□□□ -0.49
RNF4-216ENST00000511859 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
RNF4-216ENST00000511859 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
RNF4-216ENST00000511859 IKBKBO14920 756 aa12□□□□□ -0.49
RNF4-216ENST00000511859 SLC7A4O43246 635 aa12□□□□□ -0.49
RNF4-216ENST00000511859 TBL1XO60907 577 aa12□□□□□ -0.49
RNF4-216ENST00000511859 ZBED1O96006 694 aa12□□□□□ -0.49
RNF4-216ENST00000511859 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
RNF4-216ENST00000511859 SLC8A3P57103 927 aa12□□□□□ -0.49
RNF4-216ENST00000511859 C3orf38Q5JPI3 329 aa12□□□□□ -0.49
RNF4-216ENST00000511859 PIK3R6Q5UE93 754 aa12□□□□□ -0.49
RNF4-216ENST00000511859 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
RNF4-216ENST00000511859 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12□□□□□ -0.49
RNF4-216ENST00000511859 MFN1Q8IWA4 741 aa12□□□□□ -0.49
RNF4-216ENST00000511859 ARL14Q8N4G2 192 aa12□□□□□ -0.49
RNF4-216ENST00000511859 GOLGA5Q8TBA6 731 aa12□□□□□ -0.49
RNF4-216ENST00000511859 WFDC5Q8TCV5 224 aa12□□□□□ -0.49
RNF4-216ENST00000511859 RNF139Q8WU17 664 aa12□□□□□ -0.49
RNF4-216ENST00000511859 SNX21Q969T3 373 aa12□□□□□ -0.49
RNF4-216ENST00000511859 LMLNQ96KR4 655 aa12□□□□□ -0.49
RNF4-216ENST00000511859 MRGPRX3Q96LB0 322 aa12□□□□□ -0.49
RNF4-216ENST00000511859 APOLD1Q96LR9 279 aa12□□□□□ -0.49
RNF4-216ENST00000511859 SEMA3CQ99985 751 aa12□□□□□ -0.49
RNF4-216ENST00000511859 DUSP23Q9BVJ7 150 aa12□□□□□ -0.49
RNF4-216ENST00000511859 NLGN3Q9NZ94 848 aa12□□□□□ -0.49
RNF4-216ENST00000511859 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
RNF4-216ENST00000511859 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
RNF4-216ENST00000511859 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
RNF4-216ENST00000511859 SPTBN1Q01082 2364 aaKnown RBP12□□□□□ -0.49
RNF4-216ENST00000511859 ITIH6Q6UXX5 1313 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 CDRT15L2A8MXV6 281 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 IL1BP01584 269 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 ITGB2P05107 769 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 GP1BBP13224 206 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 CSKP41240 450 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PSMD8P48556 350 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 TKTL1P51854 596 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PPP2CBP62714 309 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PPP2CAP67775 309 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 UBAP2LQ14157 1087 aaKnown RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 KNOP1Q1ED39 458 aaKnown RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 LINC00303Q3SY05 128 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 SETMARQ53H47 684 aaPredicted RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 SPOPLQ6IQ16 392 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 SV2AQ7L0J3 742 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PIGZQ86VD9 579 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 TRIM69Q86WT6 500 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 CCDC117Q8IWD4 279 aaPredicted RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 UNC45BQ8IWX7 931 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PDILTQ8N807 584 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 MAPK15Q8TD08 544 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 TMEM174Q8WUU8 243 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 AZIN2Q96A70 460 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 FAM131CQ96AQ9 280 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 HEXIM2Q96MH2 286 aaKnown RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 ARHGAP9Q9BRR9 750 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 IMPG2Q9BZV3 1241 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 CUEDC2Q9H467 287 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 SFMBT1Q9UHJ3 866 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 ERVW-1Q9UQF0 538 aa11.99□□□□□ -0.49
RNF4-216ENST00000511859 MORC2Q9Y6X9 1032 aaPredicted RBP11.99□□□□□ -0.49
RNF4-216ENST00000511859 TYW5A2RUC4 315 aaKnown RBP11.98□□□□□ -0.49
RNF4-216ENST00000511859 TTC34A8MYJ7 566 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 FFAR2O15552 330 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 MOCS3O95396 460 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 GJB6O95452 261 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 GIMD1P0DJR0 217 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 ITGB6P18564 788 aa11.98□□□□□ -0.49
RNF4-216ENST00000511859 MAT2AP31153 395 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms