RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 GOLGA6L19H0YKK7 550 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF217O75362 1048 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 CNTN5O94779 1100 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ASLP04424 464 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 CALB1P05937 261 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 EPHX1P07099 455 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ADRA1BP35368 520 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ATP11AP98196 1134 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 SLC12A1Q13621 1099 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 PLEKHG6Q3KR16 790 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 PITRM1Q5JRX3 1037 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 RABGAP1LQ5R372 815 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 SFMBT2Q5VUG0 894 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 E4F1Q66K89 784 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 MCOLN2Q8IZK6 566 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 KDM1BQ8NB78 822 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 OR52K2Q8NGK3 314 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 VCPIP1Q96JH7 1222 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 PRSS16Q9NQE7 514 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ERVW-1Q9UQF0 538 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 OR51B4Q9Y5P0 310 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 THADAQ6YHU6 1953 aa16.64■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 IGHV1OR15-9A0A0B4J2B8 117 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 A0A1B0GVM2 712 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 TCAF2A6NFQ2 919 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 CLDN11O75508 207 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 GZMAP12544 262 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 SKILP12757 684 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 GGCXP38435 758 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 PTPN9P43378 593 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF177Q13360 481 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 CCDC6Q16204 474 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 ASIC2Q16515 512 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 ACBD5Q5T8D3 534 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 LPCAT2Q7L5N7 544 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF366Q8N895 744 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 C3orf20Q8ND61 904 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 OR2T3Q8NH03 318 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 SIPA1Q96FS4 1042 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 FEM1AQ9BSK4 669 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 MAGEB5Q9BZ81 275 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 MTG2Q9H4K7 406 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 CD93Q9NPY3 652 aa16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-216ENST00000511767 IGLV3-10A0A075B6K4 115 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 MOCS3O95396 460 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 SRPRAP08240 638 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 SDC4P31431 198 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 PTGER3P43115 390 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 CDH4P55283 916 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 OXCT1P55809 520 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 ECT2LQ008S8 904 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 CREB5Q02930 508 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 ALFQ53S48 1182 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 SLC36A4Q6YBV0 504 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 PRR23CQ6ZRP0 262 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 STRADAQ7RTN6 431 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 ZNF419Q96HQ0 510 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 SPACA7Q96KW9 195 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 SELENOOQ9BVL4 669 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 OSBPL2Q9H1P3 480 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 CYP8B1Q9UNU6 501 aa16.62■□□□□ 0.25
PDLIM5-216ENST00000511767 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.256e-11■■□□□ 12.7
PDLIM5-216ENST00000511767 FTLP02792 175 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 RRM1P23921 792 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 MPLP40238 635 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 TPMTP51580 245 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 HDAC4P56524 1084 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 RPL7AP62424 266 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 SF3A2Q15428 464 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 C9orf64Q5T6V5 341 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 KIAA1324Q6UXG2 1013 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 LRRC31Q6UY01 552 aa16.61■□□□□ 0.25
PDLIM5-216ENST00000511767 DEFB119Q8N690 84 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms