RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NAA16Q6N069 864 aaPredicted RBP6.16□□□□□ -1.42
GYPB-212ENST00000511198 THNSL1Q8IYQ7 743 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 FITM2Q8N6M3 262 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 SPATA5Q8NB90 893 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 COLGALT1Q8NBJ5 622 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 SLC22A17Q8WUG5 538 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 MRPS27Q92552 414 aaKnown RBP6.16□□□□□ -1.42
GYPB-212ENST00000511198 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 RNF31Q96EP0 1072 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 CCDC8Q9H0W5 538 aaPredicted RBP6.16□□□□□ -1.42
GYPB-212ENST00000511198 SH2D4AQ9H788 454 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 ACAD9Q9H845 621 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 GALNT9Q9HCQ5 603 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 CYP39A1Q9NYL5 469 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 TRHDEQ9UKU6 1024 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 LZTS1Q9Y250 596 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 IPPQ9Y573 584 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 PCDHA13Q9Y5I0 950 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 SALL3Q9BXA9 1300 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 CDHR4A6H8M9 788 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 CDX4O14627 284 aaPredicted RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 CAPN9O14815 690 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 KIAA0391O15091 583 aaKnown RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 CHRNA1P02708 482 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 TXNP10599 105 aaKnown RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 CASTP20810 708 aaKnown RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 EDNRBP24530 442 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 ITPKBP27987 946 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 GUCY2FP51841 1108 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 GNAI1P63096 354 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 SIM1P81133 766 aaPredicted RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 AMPD3Q01432 767 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 SATB1Q01826 763 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 ARHGAP1Q07960 439 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 MPP3Q13368 585 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 HTR4Q13639 388 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 WTAPQ15007 396 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 RALBP1Q15311 655 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 PRR16Q569H4 304 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 CCNI2Q6ZMN8 369 aaPredicted RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 Q8NA96 180 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 IFI44Q8TCB0 444 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 Q96MF0 132 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 SEMA4CQ9C0C4 833 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 C11orf54Q9H0W9 315 aaPredicted RBP6.15□□□□□ -1.42
GYPB-212ENST00000511198 RNF146Q9NTX7 359 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 LIMCH1Q9UPQ0 1083 aa6.15□□□□□ -1.42
GYPB-212ENST00000511198 SPENQ96T58 3664 aaKnown RBP6.15□□□□□ -1.43
GYPB-212ENST00000511198 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 KLHL33A6NCF5 533 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 GABRDO14764 452 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 SBK3P0C264 359 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 ZNF286BP0CG31 522 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 MYBL2P10244 700 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 GHRP10912 638 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 ALDH5A1P51649 535 aaPredicted RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 OAZ1P54368 228 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 FAM193AP78312 1265 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 CDC42EP1Q00587 391 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 LPIN1Q14693 890 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 ACAP2Q15057 778 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 SPOUT1Q5T280 376 aaKnown RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 RNF187Q5TA31 235 aaPredicted RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 HIST2H2BCQ6DN03 193 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 DPY19L2P1Q6NXN4 242 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 LONP2Q86WA8 852 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 NTN5Q8WTR8 489 aaPredicted RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 PNKPQ96T60 521 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 NELL2Q99435 816 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 CWH43Q9H720 699 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 UNKLQ9H9P5 680 aaKnown RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 VPS45Q9NRW7 570 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 TDP1Q9NUW8 608 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 TYW1Q9NV66 732 aaKnown RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 TESQ9UGI8 421 aaKnown RBP6.14□□□□□ -1.43
GYPB-212ENST00000511198 NAV3Q8IVL0 2385 aa6.14□□□□□ -1.43
GYPB-212ENST00000511198 LAMA4Q16363 1823 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 ASCC3Q8N3C0 2202 aaKnown RBP6.13□□□□□ -1.43
GYPB-212ENST00000511198 LNP1A1A4G5 178 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 H0Y626 953 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 SLC28A2O43868 658 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 ALDH1L1O75891 902 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 TRIM16O95361 564 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 LAMP2P13473 410 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 HOXC8P31273 242 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 VAV2P52735 878 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 KRT85P78386 507 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 CREMQ03060 361 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 ITKQ08881 620 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 PCBP2Q15366 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
GYPB-212ENST00000511198 LY6KQ17RY6 165 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 C3orf36Q3SXR2 165 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 FOXR2Q6PJQ5 311 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 CHST3Q7LGC8 479 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 KBTBD6Q86V97 674 aa6.13□□□□□ -1.43
GYPB-212ENST00000511198 NLGN4YQ8NFZ3 816 aaPredicted RBP6.13□□□□□ -1.43
GYPB-212ENST00000511198 TBC1D15Q8TC07 691 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms