RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PRICKLE1Q96MT3 831 aaPredicted RBP10.79□□□□□ -0.68
DDX41-211ENST00000510171 FAM129BQ96TA1 746 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 GOLPH3LQ9H4A5 285 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 ERVMER34-1Q9H9K5 563 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 RMND1Q9NWS8 449 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 CEP83Q9Y592 693 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 PLXNB3Q9ULL4 1909 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 WDFY3Q8IZQ1 3526 aa10.79□□□□□ -0.68
DDX41-211ENST00000510171 URB1O60287 2271 aaKnown RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 ANKRD11Q6UB99 2663 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3DA0A087WVF3 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3IA0A087WXS9 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3EA0A087X179 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3KA0A087X1G2 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3FA6NER0 549 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 TTC34A8MYJ7 566 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3LB9A6J9 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TLX3O43711 291 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 FBXO21O94952 628 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 ZIC2O95409 532 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 ADH1BP00325 375 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 PRB1P04280 392 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 PAEPP09466 180 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3HP0C7X1 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 EPHA8P29322 1005 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 NNMTP40261 264 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 RXRGP48443 463 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 PSMD8P48556 350 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 NUCB2P80303 420 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 BNIP3Q12983 259 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 ILKQ13418 452 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 RTP5Q14D33 572 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 DCAF6Q58WW2 860 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 MS4A13Q5J8X5 152 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 HES3Q5TGS1 186 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 RNF219Q5W0B1 726 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3GQ6DHY5 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3CQ6IPX1 549 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 FBXL19Q6PCT2 694 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 PRPF39Q86UA1 669 aaKnown RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 SMYD4Q8IYR2 804 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 TBC1D3Q8IZP1 549 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 STK40Q8N2I9 435 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 OXR1Q8N573 874 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 AADATQ8N5Z0 425 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 BAP1Q92560 729 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 MYEOVQ96EZ4 313 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 FCRL2Q96LA5 508 aaPredicted RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 HSFY1Q96LI6 401 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 GTPBP4Q9BZE4 634 aaKnown RBP10.78□□□□□ -0.68
DDX41-211ENST00000510171 MIS12Q9H081 205 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 PRORYQ9H606 182 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 SLCO3A1Q9UIG8 710 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 RAI2Q9Y5P3 530 aa10.78□□□□□ -0.68
DDX41-211ENST00000510171 APC2O95996 2303 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 C10orf142B7Z368 130 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 ATXN7O15265 892 aaPredicted RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 SLC16A3O15427 465 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 LUC7L3O95232 432 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 IL1BP01584 269 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 FYNP06241 537 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 CKMT2P17540 419 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 ADPRHP54922 357 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 FKBP3Q00688 224 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 STILQ15468 1287 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 TMEM270Q6UE05 265 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 APCDD1Q8J025 514 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 UBR7Q8N806 425 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 MFSD2AQ8NA29 543 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 LSM14AQ8ND56 463 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 DQX1Q8TE96 717 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 CLEC4CQ8WTT0 213 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 SLC39A13Q96H72 371 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 SERPINB11Q96P15 392 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 TSG101Q99816 390 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 NUCKS1Q9H1E3 243 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 GDPD2Q9HCC8 539 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 HOOK1Q9UJC3 728 aaKnown RBP10.77□□□□□ -0.69
DDX41-211ENST00000510171 NAALADL1Q9UQQ1 740 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 PCDHB4Q9Y5E5 795 aa10.77□□□□□ -0.69
DDX41-211ENST00000510171 M0QYV0 167 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 RNF225M0QZC1 329 aaPredicted RBP10.76□□□□□ -0.69
DDX41-211ENST00000510171 LATO43561 262 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 MAGEC1O60732 1142 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 SMC2O95347 1197 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
DDX41-211ENST00000510171 GLDCP23378 1020 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 MZF1P28698 734 aaPredicted RBP10.76□□□□□ -0.69
DDX41-211ENST00000510171 NUDT1P36639 197 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 PRCPP42785 496 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 OVGP1Q12889 678 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 NNTQ13423 1086 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 ELAVL3Q14576 367 aaKnown RBP10.76□□□□□ -0.69
DDX41-211ENST00000510171 STAT4Q14765 748 aa10.76□□□□□ -0.69
DDX41-211ENST00000510171 COBLL1Q53SF7 1204 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms