RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 SIM1P81133 766 aaPredicted RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 CFHR3Q02985 330 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 GAB1Q13480 694 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 C20orf194Q5TEA3 1177 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 ATG16L1Q676U5 607 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 BBS12Q6ZW61 710 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 RSRC2Q7L4I2 434 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 ZNF804AQ7Z570 1209 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 BCDIN3DQ7Z5W3 292 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 PTGR2Q8N8N7 351 aaPredicted RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 PPHLN1Q8NEY8 458 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 SLC2A12Q8TD20 617 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 HERC2P3Q9BVR0 1158 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 ADGRE3Q9BY15 652 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 GPR63Q9BZJ6 419 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 CLPBQ9H078 707 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 PDE11AQ9HCR9 933 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 IL17RBQ9NRM6 502 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 ASIC5Q9NY37 505 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 HEMK1Q9Y5R4 338 aaPredicted RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 COPG1Q9Y678 874 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 SCAPERQ9BY12 1400 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 INO80Q9ULG1 1556 aaPredicted RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 NPC1L1Q9UHC9 1359 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 TRPM2O94759 1503 aa3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 ZC3H13Q5T200 1668 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-216ENST00000509784 MYO3AQ8NEV4 1616 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 USP32Q8NFA0 1604 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 IQSEC2Q5JU85 1478 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 MAGI1Q96QZ7 1491 aaPredicted RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 NEURL4Q96JN8 1562 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 TMEM191CA6NGB0 347 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 B8ZZF3 427 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 GRM8O00222 908 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 CLIC1O00299 241 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 PEX12O00623 359 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 TSPAN3O60637 253 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 GCATO75600 419 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 RHOBTB3O94955 611 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 MBD4O95243 580 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 MT-CO3P00414 261 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ALDOAP04075 364 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 HNRNPA1P09651 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SLC8A1P32418 973 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ELF1P32519 619 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 STAT6P42226 847 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 VPS41P49754 854 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 RARRES1P49788 294 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SLC37A1P57057 533 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 GEMIN4P57678 1058 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 VAMP2P63027 116 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 MPP1Q00013 466 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ABHD18Q0P651 414 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 PUM1Q14671 1186 aaKnown RBP eCLIP3.48□□□□□ -1.852e-10■□□□□ 11.1
CALCOCO2-216ENST00000509784 KCNB1Q14721 858 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 MAPRE1Q15691 268 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 CNGA3Q16281 694 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 AKNAD1Q5T1N1 836 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 TMEM65Q6PI78 240 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SERPINA13PQ6UXR4 307 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 Q6ZPA2 131 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ULK2Q8IYT8 1036 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 LINC01465Q8N7H1 131 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 USP38Q8NB14 1042 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SRFBP1Q8NEF9 429 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SLC9A6Q92581 669 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 TBC1D5Q92609 795 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 KCNJ9Q92806 393 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SKA1Q96BD8 255 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 DAZAP1Q96EP5 407 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 RRP36Q96EU6 259 aaKnown RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 CCDC17Q96LX7 622 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 TESK2Q96S53 571 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ZHX3Q9H4I2 956 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 CPNE5Q9HCH3 593 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 RRAGDQ9NQL2 400 aaPredicted RBP3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SMC4Q9NTJ3 1288 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ASNSD1Q9NWL6 643 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SH3BP4Q9P0V3 963 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 HSF4Q9ULV5 492 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 ARHGAP26Q9UNA1 814 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 B3GNT3Q9Y2A9 372 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 HS3ST3A1Q9Y663 406 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 SYCP2Q9BX26 1530 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 DEPDC5O75140 1603 aa3.48□□□□□ -1.85
CALCOCO2-216ENST00000509784 IFT172Q9UG01 1749 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 MAPK8IP3Q9UPT6 1336 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 NCOA3Q9Y6Q9 1424 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 CYP3A7-CYP3A51PA0A087WV96 503 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 SAC3D1A6NKF1 404 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 C3orf70A6NLC5 250 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 TTC34A8MYJ7 566 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 PRYO14603 147 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 MATN3O15232 486 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 CD4P01730 458 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 CYP2D6P10635 497 aa3.47□□□□□ -1.85
CALCOCO2-216ENST00000509784 LYL1P12980 280 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms