RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ELMOD2Q8IZ81 293 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CENPLQ8N0S6 344 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF655Q8N720 491 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 SPATA18Q8TC71 538 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 KBTBD7Q8WVZ9 684 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PIH1D2Q8WWB5 315 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 RIN2Q8WYP3 895 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 MAFIPQ8WZ33 124 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TMEM121Q9BTD3 319 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CCDC8Q9H0W5 538 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 SYT4Q9H2B2 425 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 POLR1BQ9H9Y6 1135 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ZFP57Q9NU63 452 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SERTAD1Q9UHV2 236 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 MAD2L2Q9UI95 211 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF222Q9UK12 451 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PHTF1Q9UMS5 762 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 NME7Q9Y5B8 376 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 POMT1Q9Y6A1 747 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GAKO14976 1311 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 WDR17Q8IZU2 1322 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 BBIP1A8MTZ0 92 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 NUDT19A8MXV4 375 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 AIPO00170 330 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ZBTB24O43167 697 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 PRPSAP2O60256 369 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PTCD1O75127 700 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 ULK1O75385 1050 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ARIH2O95376 493 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 RLN2P04090 185 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PGK2P07205 417 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CSF1RP07333 972 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PET100P0DJ07 73 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 RALAP11233 206 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CYP2C9P11712 490 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 IL2RBP14784 551 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TCN1P20061 433 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 AMPD1P23109 780 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 VAMP1P23763 118 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TBXAS1P24557 533 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 PSMB9P28065 219 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 AGTR1P30556 359 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PIK3CGP48736 1102 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CDK9P50750 372 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 ADCY7P51828 1080 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GYS2P54840 703 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CD81P60033 236 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 NCS1P62166 190 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 RPS8P62241 208 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF200P98182 395 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 MYBPC1Q00872 1141 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SULT2A1Q06520 285 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CNTN1Q12860 1018 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 MOGSQ13724 837 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PDIA5Q14554 519 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CALCRLQ16602 461 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PFKFB3Q16875 520 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF181Q2M3W8 571 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 CACHD1Q5VU97 1274 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ALKBH5Q6P6C2 394 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 CASP12Q6UXS9 341 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 USP43Q70EL4 1123 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 NIM1KQ8IY84 436 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TMEM203Q969S6 136 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GAL3ST3Q96A11 431 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 C18orf8Q96DM3 657 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 OR2M2Q96R28 347 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PSMB7Q99436 277 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SLC25A23Q9BV35 468 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PCED1AQ9H1Q7 454 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 C12orf65Q9H3J6 166 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 GAREM1Q9H706 876 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GPRC5BQ9NZH0 403 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GNG8Q9UK08 70 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 A0A0A6YYH2 397 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TMEM120BA0PK00 339 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 A6NJ64 397 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PRSS44E7EML9 344 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ATP5J2-PTCD1G3V325 749 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 DENRO43583 198 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 VAPBO95292 243 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SNAP29O95721 258 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PIGRP01833 764 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 HLA-DRAP01903 254 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SERPINF2P08697 491 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 GSTT2P0CG29 244 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 IMPDH1P20839 514 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 IL4RP24394 825 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 TYK2P29597 1187 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 MAPK8P45983 427 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ARCN1P48444 511 aaKnown RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 CCNHP51946 323 aaPredicted RBP3.64□□□□□ -1.83
USP53-205ENST00000509769 OGDHQ02218 1023 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF45Q02386 682 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 FGL1Q08830 312 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 SLC13A2Q13183 592 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ACVR2BQ13705 512 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 PTK6Q13882 451 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 ZNF699Q32M78 642 aa3.64□□□□□ -1.83
USP53-205ENST00000509769 AKIRIN2Q53H80 203 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms