RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 RALGAPA1Q6GYQ0 2036 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 BCLAF3A2AJT9 711 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 GOLGA6L19H0YKK7 550 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF217O75362 1048 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 CNTN5O94779 1100 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ASLP04424 464 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 CALB1P05937 261 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 EPHX1P07099 455 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ADRA1BP35368 520 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ATP11AP98196 1134 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 SLC12A1Q13621 1099 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 PLEKHG6Q3KR16 790 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 PITRM1Q5JRX3 1037 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 RABGAP1LQ5R372 815 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 SFMBT2Q5VUG0 894 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 E4F1Q66K89 784 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 MCOLN2Q8IZK6 566 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 KDM1BQ8NB78 822 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 OR52K2Q8NGK3 314 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 VCPIP1Q96JH7 1222 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 PRSS16Q9NQE7 514 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 USP18Q9UMW8 372 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ERVW-1Q9UQF0 538 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 OR51B4Q9Y5P0 310 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 THADAQ6YHU6 1953 aa16.64■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 IGHV1OR15-9A0A0B4J2B8 117 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 A0A1B0GVM2 712 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 TCAF2A6NFQ2 919 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 CLDN11O75508 207 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 GZMAP12544 262 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 SKILP12757 684 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 GGCXP38435 758 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 PTPN9P43378 593 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF177Q13360 481 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 CCDC6Q16204 474 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 ASIC2Q16515 512 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 ACBD5Q5T8D3 534 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 LPCAT2Q7L5N7 544 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF366Q8N895 744 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 C3orf20Q8ND61 904 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 OR2T3Q8NH03 318 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 SIPA1Q96FS4 1042 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 FEM1AQ9BSK4 669 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 MAGEB5Q9BZ81 275 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 MTG2Q9H4K7 406 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 CD93Q9NPY3 652 aa16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-212ENST00000509333 IGLV3-10A0A075B6K4 115 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 MOCS3O95396 460 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 SRPRAP08240 638 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 SDC4P31431 198 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 PTGER3P43115 390 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 CDH4P55283 916 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 OXCT1P55809 520 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 ECT2LQ008S8 904 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 CREB5Q02930 508 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 ALFQ53S48 1182 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 SLC36A4Q6YBV0 504 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 PRR23CQ6ZRP0 262 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 STRADAQ7RTN6 431 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF419Q96HQ0 510 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 SPACA7Q96KW9 195 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 SELENOOQ9BVL4 669 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 OSBPL2Q9H1P3 480 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 CYP8B1Q9UNU6 501 aa16.62■□□□□ 0.25
PDLIM5-212ENST00000509333 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.258e-10■■■□□ 15.6
PDLIM5-212ENST00000509333 FTLP02792 175 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 RRM1P23921 792 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 MPLP40238 635 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 TPMTP51580 245 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 HDAC4P56524 1084 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 RPL7AP62424 266 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 SF3A2Q15428 464 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 C9orf64Q5T6V5 341 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms