RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FDFT1P37268 417 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 TAF10Q12962 218 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 NR1H3Q13133 447 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 TRIM60Q495X7 471 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 MCUQ8NE86 351 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 GSDMBQ8TAX9 411 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 ZNF419Q96HQ0 510 aaPredicted RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 RRN3Q9NYV6 651 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 ACTL7BQ9Y614 415 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 IQANK1A0A1B0GTG1 560 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 INPPL1O15357 1258 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 C1QAP02745 245 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 GALTP07902 379 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 SARNPP82979 210 aaKnown RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 NFE2Q16621 373 aaPredicted RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 PARP6Q2NL67 630 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 SPOUT1Q5T280 376 aaKnown RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 CERCAMQ5T4B2 595 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 CDHR3Q6ZTQ4 885 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 CCDC121Q6ZUS5 278 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 SLC26A11Q86WA9 606 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 MICALL1Q8N3F8 863 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 PHACTR1Q9C0D0 580 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 XAB2Q9HCS7 855 aaKnown RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 FRMPD3Q5JV73 1810 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 KIAA0100Q14667 2235 aaKnown RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 MTMR11A4FU01 709 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 SCAMP3O14828 347 aaKnown RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 GNRH1P01148 92 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 NEFHP12036 1026 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 CCL5P13501 91 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 SERPINB6P35237 376 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 MAGEA3P43357 314 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 MAGEA6P43360 314 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 TLE2Q04725 743 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 PPIDQ08752 370 aaKnown RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 FAM133BQ5BKY9 247 aaKnown RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 C10orf120Q5SQS8 335 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 CGB2Q6NT52 195 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 DENND1AQ8TEH3 1009 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 SLC39A8Q9C0K1 460 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 NSRP1Q9H0G5 558 aaKnown RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 PNPLA8Q9NP80 782 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 ABCF3Q9NUQ8 709 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 PCMTD2Q9NV79 361 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 ATP11BQ9Y2G3 1177 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 PSAT1Q9Y617 370 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■■ 87.1
PHF3-209ENST00000509330 IGLV3-25P01717 112 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 AIF1P55008 147 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 CORO7P57737 925 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 RASIP1Q5U651 963 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 PIK3R6Q5UE93 754 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 ATPAF2Q8N5M1 289 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 SGSM3Q96HU1 749 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 MAGEB18Q96M61 343 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 MLPHQ9BV36 600 aaPredicted RBP15.25■□□□□ 0.03
PHF3-209ENST00000509330 PITPNM3Q9BZ71 974 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 CCDC134Q9H6E4 229 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 CCSER2Q9H7U1 834 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 NEU3Q9UQ49 428 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
PHF3-209ENST00000509330 TTC24A2A3L6 582 aaPredicted RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 SDR42E2A6NKP2 422 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 SRRM3A6NNA2 597 aaPredicted RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 E9PAM4 449 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 SNX3O60493 162 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 GALNT2Q10471 571 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 OVGP1Q12889 678 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 ZNF784Q8NCA9 323 aaPredicted RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 ARNTL2Q8WYA1 636 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 SMG5Q9UPR3 1016 aaKnown RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 PCDHA11Q9Y5I1 949 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 TMEM189-UBE2V1I3L0A0 370 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 PRPF4O43172 522 aaKnown RBP eCLIP15.24■□□□□ 0.03
PHF3-209ENST00000509330 CNTN5O94779 1100 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 VNN2O95498 520 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 YWHAQP27348 245 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 CNTD1Q8N815 330 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 CCDC63Q8NA47 563 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 LRRC8CQ8TDW0 803 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 MECRQ9BV79 373 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 SYN3O14994 580 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 MX2P20592 715 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 TBX4P57082 545 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 CRYMQ14894 314 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 ARHGEF6Q15052 776 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 TEX44Q53QW1 395 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 RAP1GAP2Q684P5 730 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 LRRC8BQ6P9F7 803 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 C6orf89Q6UWU4 347 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms