RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 NBNO60934 754 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 MYL3P08590 195 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 CT47B1P0C2W7 299 aaPredicted RBP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 U2AF1L5P0DN76 240 aaPredicted RBP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 HALP42357 657 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 RAE1P78406 368 aaKnown RBP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 U2AF1Q01081 240 aaKnown RBP eCLIP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 SAFBQ15424 915 aaKnown RBP eCLIP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 HLFQ16534 295 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 TMEM240Q5SV17 173 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 ZDHHC24Q6UX98 284 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 LRIG3Q6UXM1 1119 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 LYG1Q8N1E2 194 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 TCP11L2Q8N4U5 519 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 PARD3BQ8TEW8 1205 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 ZFPM2Q8WW38 1151 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 AKAP1Q92667 903 aaKnown RBP eCLIP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 SPSB4Q96A44 273 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 RUNDC1Q96C34 613 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 LRGUKQ96M69 825 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 PGLYRP2Q96PD5 576 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 UHRF2Q96PU4 802 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF518BQ9C0D4 1074 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 PLCB1Q9NQ66 1216 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 ANKRD6Q9Y2G4 727 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 SCINQ9Y6U3 715 aa2.41□□□□□ -2.02
XRCC4-204ENST00000509268 FRMPD2Q68DX3 1309 aaPredicted RBP2.41□□□□□ -2.02
XRCC4-204ENST00000509268 A6NNZ2 444 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 AP1G1O43747 822 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF500O60304 480 aaPredicted RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 SNUPNO95149 360 aaKnown RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 MAN1A1P33908 653 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 RECQLP46063 649 aaPredicted RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 DGKQP52824 942 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ZP1P60852 638 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 TRAF1Q13077 416 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 SLC13A2Q13183 592 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 STK3Q13188 491 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ARHGAP29Q52LW3 1261 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ALFQ53S48 1182 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 STPG1Q5TH74 334 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 B3GNT9Q6UX72 402 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 KCTD20Q7Z5Y7 419 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 RHPN2Q8IUC4 686 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 P3H2Q8IVL5 708 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 FAM217AQ8IXS0 508 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 CPXCR1Q8N123 301 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 PAF1Q8N7H5 531 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 GPATCH11Q8N954 259 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 FAM216AQ8WUB2 273 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 MAML1Q92585 1016 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ZDHHC12Q96GR4 267 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 PRR11Q96HE9 360 aaPredicted RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 AIFM3Q96NN9 605 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 HIST1H2AAQ96QV6 131 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ACO2Q99798 780 aaKnown RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 PAGR1Q9BTK6 254 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 NAA15Q9BXJ9 866 aaKnown RBP2.4□□□□□ -2.02
XRCC4-204ENST00000509268 FAM83DQ9H4H8 585 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 SAP30LQ9HAJ7 183 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 SAGE1Q9NXZ1 904 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 FNIP2Q9P278 1114 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF69Q9UC07 566 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 STXBP5LQ9Y2K9 1186 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 SLC27A6Q9Y2P4 619 aa2.4□□□□□ -2.02
XRCC4-204ENST00000509268 IGKV3D-15A0A087WSY6 115 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TMEM233B4DJY2 109 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 PIAS2O75928 621 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 LDHCP07864 332 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 ZNF883P0CG24 379 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 SLC5A1P13866 664 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 PTDSS1P48651 473 aaKnown RBP2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TUBA1BP68363 451 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 CHAF1AQ13111 956 aaPredicted RBP2.4□□□□□ -2.03
XRCC4-204ENST00000509268 DMP1Q13316 513 aaPredicted RBP2.4□□□□□ -2.03
XRCC4-204ENST00000509268 KRT72Q14CN4 511 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 PLCB4Q15147 1175 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TUBB8Q3ZCM7 444 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 C14orf177Q52M58 125 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 DCAF12L2Q5VW00 463 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 GRHL2Q6ISB3 625 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 CCDC70Q6NSX1 233 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 HMBOX1Q6NT76 420 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 C1orf228Q6PIY5 440 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 SRLQ86TD4 932 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 SMAP1Q8IYB5 467 aaPredicted RBP2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TEX19Q8NA77 164 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 HSPBAP1Q96EW2 488 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 MVB12AQ96EY5 273 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TAAR9Q96RI9 348 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 HERPUD2Q9BSE4 406 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 TRIM2Q9C040 744 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 ZHX3Q9H4I2 956 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 CATSPERBQ9H7T0 1116 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 ARMT1Q9H993 441 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 SMURF2Q9HAU4 748 aa2.4□□□□□ -2.03
XRCC4-204ENST00000509268 MORC2Q9Y6X9 1032 aaPredicted RBP2.4□□□□□ -2.03
XRCC4-204ENST00000509268 COL15A1P39059 1388 aa2.39□□□□□ -2.03
XRCC4-204ENST00000509268 A0A088AWK7 358 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms