RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TAF4O00268 1085 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 C7P10643 843 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 GGCXP38435 758 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 CSKP41240 450 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 ACADSBP45954 432 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SLC11A2P49281 568 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 ZBTB16Q05516 673 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 ACAP1Q15027 740 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 TEAD4Q15561 434 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 MEA1Q16626 185 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 TTC31Q49AM3 519 aaPredicted RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 FNDC3BQ53EP0 1204 aaKnown RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 TRNP1Q6NT89 227 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 OLFML1Q6UWY5 402 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 FAM124AQ86V42 546 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 LGI2Q8N0V4 545 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 DEFB106AQ8N104 65 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SNX19Q92543 992 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SLC2A13Q96QE2 648 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 CDC6Q99741 560 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 TUBGCP2Q9BSJ2 902 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 NUP62CLQ9H1M0 184 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 NDST4Q9H3R1 872 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 PRSS16Q9NQE7 514 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SUN2Q9UH99 717 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 PCDHGB2Q9Y5G2 931 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 SNX10Q9Y5X0 201 aa11.29□□□□□ -0.6
RNF4-212ENST00000509258 ARID1BQ8NFD5 2236 aaPredicted RBP11.29□□□□□ -0.6
RNF4-212ENST00000509258 TDRD6O60522 2096 aaKnown RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 SYNJ2BP-COX16A0A087WUM0 186 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 KCNU1A8MYU2 1149 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 EPHB6O15197 1021 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 MED7O43513 233 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 DNTTP04053 509 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 TACR2P21452 398 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 ACSL1P33121 698 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 YWHAZP63104 245 aaKnown RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 CENPCQ03188 943 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 NNTQ13423 1086 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 HLA-BQ31612 363 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 MPP7Q5T2T1 576 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 C14orf80Q86SX3 495 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 HJURPQ8NCD3 748 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 BAHD1Q8TBE0 780 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 TTC17Q96AE7 1141 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 C6orf106Q9H6K1 298 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 POPDC2Q9HBU9 364 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 KIAA1522Q9P206 1035 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 SERGEFQ9UGK8 458 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.28□□□□□ -0.6
RNF4-212ENST00000509258 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
RNF4-212ENST00000509258 CELSR3Q9NYQ7 3312 aa11.27□□□□□ -0.6
RNF4-212ENST00000509258 A0A1B0GVT2 93 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 TTC34A8MYJ7 566 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 SIN3BO75182 1162 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 LUC7L3O95232 432 aaKnown RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 SEMA4FO95754 770 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 DLDP09622 509 aaKnown RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 VAV1P15498 845 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 POLR2EP19388 210 aaKnown RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 MZF1P28698 734 aaPredicted RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 ERCC5P28715 1186 aaPredicted RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 GRIA4P48058 902 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 STK19P49842 368 aaPredicted RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 DRAP1Q14919 205 aaPredicted RBP11.27□□□□□ -0.61
RNF4-212ENST00000509258 INAVAQ3KP66 663 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 RAB6CQ53S08 254 aa11.27□□□□□ -0.61
RNF4-212ENST00000509258 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms