RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC24A5Q71RS6 500 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 LRRTM3Q86VH5 581 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 IGDCC3Q8IVU1 814 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 CDKL3Q8IVW4 592 aaPredicted RBP11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 PTPRN2Q92932 1015 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 MIPEPQ99797 713 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 VCXQ9H320 206 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 POPDC2Q9HBU9 364 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 RAB6BQ9NRW1 208 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 PIGVQ9NUD9 493 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 TRIM49D1C9J1S8 452 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 HHLA1C9JL84 531 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ENTPD5O75356 428 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ZBED1O96006 694 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 APOEP02649 317 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CYP11A1P05108 521 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 MYL2P10916 166 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TPSB2P20231 275 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 BGNP21810 368 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CRHR1P34998 444 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 NOS2P35228 1153 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 NR2C2P49116 596 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 DAOAP59103 153 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 KLC1Q07866 573 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TPSAB1Q15661 275 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 DNAL1Q4LDG9 190 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 RAB41Q5JT25 222 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 IRGCQ6NXR0 463 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TIFABQ6ZNK6 161 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CTAGE3PQ8IX95 158 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 E2F7Q96AV8 911 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC2A13Q96QE2 648 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 NPY6RQ99463 290 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 KLF6Q99612 283 aaPredicted RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ACBD6Q9BR61 282 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 FAM96AQ9H5X1 160 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 STN1Q9H668 368 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 XAB2Q9HCS7 855 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ETNK2Q9NVF9 386 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 SIRPGQ9P1W8 387 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 STX18Q9P2W9 335 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 DNAJB4Q9UDY4 337 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 LRCH1Q9Y2L9 728 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ARVCFO00192 962 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 FCHO1O14526 889 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CAPN9O14815 690 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 KCNN4O15554 427 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ZNF189O75820 626 aaPredicted RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 NEBLO76041 1014 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 PSMG1O95456 288 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 AMHP03971 560 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 PAX7P23759 505 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 RBL1P28749 1068 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 KHDC1Q4VXA5 237 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 LRRC8DQ7L1W4 858 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 BHLHA9Q7RTU4 235 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 METTL23Q86XA0 190 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CRLF3Q8IUI8 442 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 PPM1NQ8N819 430 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 GSDMBQ8TAX9 411 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC7A14Q8TBB6 771 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ACMSDQ8TDX5 336 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 EDEM1Q92611 657 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TAS2R1Q9NYW7 299 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 ANGPTL2Q9UKU9 493 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 FZD10Q9ULW2 581 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 TTLL3Q9Y4R7 772 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 USP3Q9Y6I4 520 aa11.31□□□□□ -0.6
SH3RF1-203ENST00000508685 I6L893 689 aaPredicted RBP11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 INPPL1O15357 1258 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 NBNO60934 754 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 GCATO75600 419 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 C1QAP02745 245 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 OR4Q2P0C623 313 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 NCAM1P13591 858 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 PGM1P36871 562 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
SH3RF1-203ENST00000508685 DCLRE1AQ6PJP8 1040 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms