RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CCNG1P51959 295 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 BOP1Q14137 746 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 KCNB1Q14721 858 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 KIF22Q14807 665 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PTPN21Q16825 1174 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PROSER3Q2NL68 480 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 KBTBD12Q3ZCT8 623 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 CFAP58Q5T655 872 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 GKAP1Q5VSY0 366 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 NAA35Q5VZE5 725 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 ADALQ6DHV7 355 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 RUFY3Q7L099 469 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 USP37Q86T82 979 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM90A1Q86YD7 464 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 MYLK4Q86YV6 388 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TMTC1Q8IUR5 882 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 CACNA2D3Q8IZS8 1091 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 LRRC43Q8N309 656 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 SDR16C5Q8N3Y7 309 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 EIF1ADQ8N9N8 165 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 C9orf106Q8NAJ2 232 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 RASSF8Q8NHQ8 419 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PARD3BQ8TEW8 1205 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TSR2Q969E8 191 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PPP2R3CQ969Q6 453 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TEKT1Q969V4 418 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 RBM41Q96IZ5 413 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TCHPQ9BT92 498 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 RABEP2Q9H5N1 569 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 RMI1Q9H9A7 625 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 SUN2Q9UH99 717 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF148Q9UQR1 794 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 POLHQ9Y253 713 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 QRICH2Q9H0J4 1663 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 MAP3K15Q6ZN16 1313 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TNRC18O15417 2968 aaPredicted RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 KNDC1Q76NI1 1749 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 LRRIQ3A6PVS8 624 aaPredicted RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 AKR1B15C9JRZ8 316 aaPredicted RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SMIM22K7EJ46 135 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 MYO1FO00160 1098 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 BIRC5O15392 142 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 JTBO76095 146 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 YEATS4O95619 227 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 GNAI2P04899 355 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC3A2P08195 630 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 MMP10P09238 476 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 FTH1P19P0C7X4 201 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TROVE2P10155 538 aaKnown RBP eCLIP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 HARSP12081 509 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 CASP14P31944 242 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RANBP1P43487 201 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF131P52739 623 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RBM5P52756 815 aaKnown RBP eCLIP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 VSNL1P62760 191 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TCF15Q12870 199 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 BIRC3Q13489 604 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ETFDHQ16134 617 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC44A4Q53GD3 710 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 C11orf57Q6ZUT1 292 aaPredicted RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RASGRP2Q7LDG7 609 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC29A4Q7RTT9 530 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 PPP1R32Q7Z5V6 425 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 CD302Q8IX05 232 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 EXOC8Q8IYI6 725 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 MIER2Q8N344 545 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SAMD3Q8N6K7 520 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TRIML1Q8N9V2 468 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 FANCBQ8NB91 859 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ACRBPQ8NEB7 543 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM46DQ8NEK8 389 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF473Q8WTR7 871 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 NSMCE1Q8WV22 266 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 OPTNQ96CV9 577 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 REPS1Q96D71 796 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 PLEKHF1Q96S99 279 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SMC6Q96SB8 1091 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TSGA10Q9BZW7 698 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 NSRP1Q9H0G5 558 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 UNC45AQ9H3U1 944 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ZWILCHQ9H900 591 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 CNOT10Q9H9A5 744 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 NOD2Q9HC29 1040 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 NRIP3Q9NQ35 241 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ATXN10Q9UBB4 475 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RNF14Q9UBS8 474 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TPCN1Q9ULQ1 816 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RPL26L1Q9UNX3 145 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 RIPOR2Q9Y4F9 1068 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 SNX14Q9Y5W7 946 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 GRIN2DO15399 1336 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 TNKSO95271 1327 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 ABCC12Q96J65 1359 aa4.87□□□□□ -1.63
PDLIM5-211ENST00000508531 NHSQ6T4R5 1651 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms