RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NEK5Q6P3R8 708 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LRRC55Q6ZSA7 311 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LDHDQ86WU2 507 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LRRC49Q8IUZ0 686 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CCDC36Q8IYA8 594 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 UTP15Q8TED0 518 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM172AQ8WUF8 416 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 EHD1Q9H4M9 534 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 EBF3Q9H4W6 596 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 SPEF1Q9Y4P9 236 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 SLIT1O75093 1534 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 MYO3AQ8NEV4 1616 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM205AQ6ZU69 1335 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 M0QX08 132 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TPP1O14773 563 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 HAT1O14929 419 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 MSH4O15457 936 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CYP27B1O15528 508 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 KLRC4O43908 158 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 GRAP2O75791 330 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PRLP01236 227 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 DBTP11182 482 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 MYL12AP19105 171 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC5A3P53794 718 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 IST1P53990 364 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LGALS3BPQ08380 585 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TYW3Q6IPR3 259 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 GADL1Q6ZQY3 521 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 C16orf62Q7Z3J2 963 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 KCNMB4Q86W47 210 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 DEPDC4Q8N2C3 294 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TEKT5Q96M29 485 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 NMUR2Q9GZQ4 415 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ZFYVE28Q9HCC9 887 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LATS2Q9NRM7 1088 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 WWOXQ9NZC7 414 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 WDR27A2RRH5 827 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 STX11O75558 287 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TSPAN19P0C672 248 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LBPP18428 481 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LTKP29376 864 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CCNFP41002 786 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CLCN2P51788 898 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ACLYP53396 1101 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CYP24A1Q07973 514 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CDH17Q12864 832 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ITGA7Q13683 1181 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TTLL9Q3SXZ7 439 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CMPK2Q5EBM0 449 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ANGEL2Q5VTE6 544 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PTRHD1Q6GMV3 140 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 EIF3MQ7L2H7 374 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PAGE2Q7Z2X7 111 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 KDELC2Q7Z4H8 507 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CHSY1Q86X52 802 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CBWD2Q8IUF1 395 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF540Q8NDQ6 660 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PIGBQ92521 554 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 MYLPFQ96A32 169 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 HOPXQ9BPY8 73 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 TSEN34Q9BSV6 310 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF341Q9BYN7 854 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 DPY30Q9C005 99 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CDH19Q9H159 772 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 RNF146Q9NTX7 359 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ADPRHL2Q9NX46 363 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF624Q9P2J8 865 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 RBMX2Q9Y388 322 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LOC100506127A0A0U1RQW1 187 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 NOS1APO75052 506 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 BPGMP07738 259 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PABPC1P11940 636 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 MLNP12872 115 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ACTR3P61158 418 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 CNTN1Q12860 1018 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 DNAAF5Q86Y56 855 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 C12orf56Q8IXR9 622 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ENDOVQ8N8Q3 282 aaKnown RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 FLAD1Q8NFF5 587 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LNX1Q8TBB1 728 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 RCN3Q96D15 328 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 FOPNLQ96NB1 174 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 REEP1Q9H902 201 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 PCDH12Q9NPG4 1184 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 LEF1Q9UJU2 399 aaPredicted RBP7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 GMPPBQ9Y5P6 360 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 ALKQ9UM73 1620 aa7.45□□□□□ -1.22
UBE2D3-224ENST00000508474 NOTOA8MTQ0 251 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 SNAP23O00161 211 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 H6PDO95479 791 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 MOCS2O96007 188 aaPredicted RBP7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 CDC42EP1Q00587 391 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 PAGE2BQ5JRK9 111 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 KLHDC10Q6PID8 442 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 PGAM4Q8N0Y7 254 aa7.44□□□□□ -1.22
UBE2D3-224ENST00000508474 SYNE4Q8N205 404 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms