RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ARHGEF4Q9NR80 690 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 TMEM248Q9NWD8 314 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 HYOU1Q9Y4L1 999 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 SNX10Q9Y5X0 201 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 CAPN6Q9Y6Q1 641 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 MYO10Q9HD67 2058 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 KIF26AQ9ULI4 1882 aaPredicted RBP20.65■□□□□ 0.9
USP53-203ENST00000507597 TBC1D3BA6NDS4 549 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 OTOL1A6NHN0 477 aaPredicted RBP20.65■□□□□ 0.9
USP53-203ENST00000507597 RHOCP08134 193 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 TCF4P15884 667 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 KDELR1P24390 212 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 STARD6P59095 220 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 LRRC32Q14392 662 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 RPS6KA1Q15418 735 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 CA9Q16790 459 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 RNF43Q68DV7 783 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 ANKS1BQ7Z6G8 1248 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 AHI1Q8N157 1196 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 SIX5Q8N196 739 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 RTL3Q8N8U3 475 aaKnown RBP20.65■□□□□ 0.9
USP53-203ENST00000507597 MPP6Q9NZW5 540 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 JRKLQ9Y4A0 524 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 C5orf42Q9H799 3197 aa20.65■□□□□ 0.9
USP53-203ENST00000507597 ILVBLA1L0T0 632 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 FAM72CH0Y354 149 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 GOT1P17174 413 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 TNFRSF4P43489 277 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 GALK1P51570 392 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 SGSHP51688 502 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 YBEYP58557 167 aaPredicted RBP20.64■□□□□ 0.89
USP53-203ENST00000507597 SULT2A1Q06520 285 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 TFDP2Q14188 446 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 EIF4HQ15056 248 aaKnown RBP20.64■□□□□ 0.89
USP53-203ENST00000507597 DGKKQ5KSL6 1271 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 FAM72AQ5TYM5 149 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 TXNRD3NBQ6F5E7 133 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 FAM72DQ6L9T8 149 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 FAM72BQ86X60 149 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 GOLPH3Q9H4A6 298 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 CWC15Q9P013 229 aaKnown RBP20.64■□□□□ 0.89
USP53-203ENST00000507597 HPCAL4Q9UM19 191 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 TBC1D30Q9Y2I9 924 aa20.64■□□□□ 0.89
USP53-203ENST00000507597 KANSL1LA0AUZ9 987 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 KAT7O95251 611 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 FTCDO95954 541 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 ATP5BP06576 529 aaKnown RBP20.63■□□□□ 0.89
USP53-203ENST00000507597 PABPC1P11940 636 aaKnown RBP20.63■□□□□ 0.89
USP53-203ENST00000507597 ERCC2P18074 760 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 OPRD1P41143 372 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 SOX9P48436 509 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 DPYSL3Q14195 570 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 ATP13A4Q4VNC1 1196 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 ALFQ53S48 1182 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 ZNF569Q5MCW4 686 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 TMCO3Q6UWJ1 677 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 BZW1Q7L1Q6 419 aaKnown RBP20.63■□□□□ 0.89
USP53-203ENST00000507597 TFAP2DQ7Z6R9 452 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 SYNPOQ8N3V7 929 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.63■□□□□ 0.89
USP53-203ENST00000507597 TERB1Q8NA31 727 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 KCNV2Q8TDN2 545 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 CSPG4P5Q96PW8 444 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 OSBPL6Q9BZF3 934 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 MUC3BQ9H195 1237 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 MAGEH1Q9H213 219 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 GGA2Q9UJY4 613 aa20.63■□□□□ 0.89
USP53-203ENST00000507597 A0A0A0MRY4 1105 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 NPC1O15118 1278 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 RAMP2O60895 175 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 CNTN5O94779 1100 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 CISD3P0C7P0 127 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 POLR2EP19388 210 aaKnown RBP20.62■□□□□ 0.89
USP53-203ENST00000507597 ARSEP51690 589 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 NDST2P52849 883 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 PON2Q15165 354 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 ANKRD20A8PQ5CZ79 823 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 TFDP3Q5H9I0 405 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 TMEM196Q5HYL7 178 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 MEI1Q5TIA1 1274 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 TRIM67Q6ZTA4 783 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 NLRP14Q86W24 1093 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 HES6Q96HZ4 224 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 ABCB8Q9NUT2 735 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 EFR3BQ9Y2G0 817 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 ZKSCAN5Q9Y2L8 839 aa20.62■□□□□ 0.89
USP53-203ENST00000507597 PI4K2BG5E9Z4 385 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 TNFRSF10AO00220 468 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 ASLP04424 464 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 NNMTP40261 264 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 SLC6A11P48066 632 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 PLK1P53350 603 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 POLD3Q15054 466 aaPredicted RBP20.61■□□□□ 0.89
USP53-203ENST00000507597 PPP2R5EQ16537 467 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 GAB4Q2WGN9 574 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 PARP15Q460N3 678 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 SEL1L2Q5TEA6 688 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 RNF219Q5W0B1 726 aaPredicted RBP20.61■□□□□ 0.89
USP53-203ENST00000507597 TRMT11Q7Z4G4 463 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms