RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RHOQP17081 205 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 HOXD9P28356 352 aaPredicted RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 GDI1P31150 447 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 CETN2P41208 172 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 DYNLT1P63172 113 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 TNK2Q07912 1038 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 KLF1Q13351 362 aaPredicted RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 DHCR24Q15392 516 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 AAK1Q2M2I8 961 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 MPPE1Q53F39 396 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 RNF43Q68DV7 783 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 NPNTQ6UXI9 565 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 BBS12Q6ZW61 710 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 TFAP2DQ7Z6R9 452 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 CREG2Q8IUH2 290 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 YAF2Q8IY57 180 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 NPWQ8N729 165 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 RTL3Q8N8U3 475 aaKnown RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 WFDC5Q8TCV5 224 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 IRF7Q92985 503 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 NECAB3Q96P71 396 aaPredicted RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 TRMT61BQ9BVS5 477 aaKnown RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 MAK16Q9BXY0 300 aaKnown RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 KLC2Q9H0B6 622 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 CATSPERBQ9H7T0 1116 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 KCNK12Q9HB15 430 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 TMEM248Q9NWD8 314 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 TTC7AQ9ULT0 858 aaPredicted RBP14.6□□□□□ -0.07
RNF4-208ENST00000507247 CLEC4EQ9ULY5 219 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 EFR3BQ9Y2G0 817 aa14.6□□□□□ -0.07
RNF4-208ENST00000507247 A0A1B0GVM2 712 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 TCAF2A6NFQ2 919 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 ARNTLO00327 626 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 PDE2AO00408 941 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 MFSD11O43934 449 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 NFATC1O95644 943 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 PENKP01210 267 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 FGGP02679 453 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 ASGR2P07307 311 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 CDH4P55283 916 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 SIX1Q15475 284 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 GAB4Q2WGN9 574 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 TTC39BQ5VTQ0 682 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 CHST9Q7L1S5 443 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 OR52K2Q8NGK3 314 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 ACTRT1Q8TDG2 376 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.59□□□□□ -0.07
RNF4-208ENST00000507247 DDI1Q8WTU0 396 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 ATP2A3Q93084 1043 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 HAUS1Q96CS2 278 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 BBS2Q9BXC9 721 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 ECT2Q9H8V3 914 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 MARK1Q9P0L2 795 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 SHROOM3Q8TF72 1996 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 C5orf42Q9H799 3197 aa14.59□□□□□ -0.07
RNF4-208ENST00000507247 MUC3AQ02505 3323 aa14.58□□□□□ -0.07
RNF4-208ENST00000507247 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 PGRMC1O00264 195 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 CLDN11O75508 207 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 MAP3K6O95382 1288 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 CYBBP04839 570 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 BMP1P13497 986 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 TYRP14679 529 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 PECAM1P16284 738 aaPredicted RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 GBE1Q04446 702 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 SLC10A2Q12908 348 aaPredicted RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 RUNX3Q13761 415 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 TFDP2Q14188 446 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 PAFAH1B3Q15102 231 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 LONRF2Q1L5Z9 754 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 ANO4Q32M45 955 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 DNTTIP2Q5QJE6 756 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 MPP7Q5T2T1 576 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 ARHGAP12Q8IWW6 846 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 CARNMT1Q8N4J0 409 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 SLC44A3Q8N4M1 653 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 NOL6Q9H6R4 1146 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 IGSF9Q9P2J2 1179 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 SAE1Q9UBE0 346 aaPredicted RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 CDC23Q9UJX2 597 aa14.58□□□□□ -0.08
RNF4-208ENST00000507247 R3HDM2Q9Y2K5 976 aaKnown RBP14.58□□□□□ -0.08
RNF4-208ENST00000507247 HOXC11O43248 304 aaPredicted RBP14.57□□□□□ -0.08
RNF4-208ENST00000507247 TJP3O95049 919 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 ADH1CP00326 375 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 ADH5P11766 374 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 TGM2P21980 687 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 OR1E1P30953 314 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 MAPKAPK2P49137 400 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 GAD2Q05329 585 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms