RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 WDR91A4D1P6 747 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ASMTLO95671 621 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 APOEP02649 317 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 NFKB1P19838 968 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ITGB8P26012 769 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CCR1P32246 355 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 GMPRP36959 345 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 HCAR3P49019 387 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 PSMD5Q16401 504 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 MANEALQ5VSG8 457 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CGB2Q6NT52 195 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 OXNAD1Q96HP4 312 aaPredicted RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 VANGL2Q9ULK5 521 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 HMX2A2RU54 273 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 KCNU1A8MYU2 1149 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ATF6P18850 670 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ADRA1DP25100 572 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CDHR3Q6ZTQ4 885 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 TFAP2DQ7Z6R9 452 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CIR1Q86X95 450 aaPredicted RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 SPATA22Q8NHS9 363 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 FUBP3Q96I24 572 aaKnown RBP eCLIP12.51□□□□□ -0.41
LIN54-206ENST00000506560 C8orf48Q96LL4 319 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 TGS1Q96RS0 853 aaKnown RBP12.51□□□□□ -0.41
LIN54-206ENST00000506560 OSBPL2Q9H1P3 480 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 CCSER2Q9H7U1 834 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 NKIRAS1Q9NYS0 192 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 ACTL7BQ9Y614 415 aa12.51□□□□□ -0.41
LIN54-206ENST00000506560 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 CNTN5O94779 1100 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
LIN54-206ENST00000506560 TPH1P17752 444 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 TAC1P20366 129 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 FDFT1P37268 417 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 TUBP50607 506 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 PRMT2P55345 433 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 PARP6Q2NL67 630 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 C6orf89Q6UWU4 347 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 MON1AQ86VX9 555 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 PSAT1Q9Y617 370 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 TRIM49D1C9J1S8 452 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 E9PAM4 449 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 MT-CYBP00156 380 aaPredicted RBP12.5□□□□□ -0.41
LIN54-206ENST00000506560 INHBAP08476 426 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 PAX3P23760 479 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 ALFQ53S48 1182 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 SH2D5Q6ZV89 423 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 STAMBPL1Q96FJ0 436 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 NOL6Q9H6R4 1146 aaKnown RBP12.5□□□□□ -0.41
LIN54-206ENST00000506560 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
LIN54-206ENST00000506560 RANBP2P49792 3224 aaKnown RBP12.5□□□□□ -0.41
LIN54-206ENST00000506560 HGSO14964 777 aaPredicted RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 CXCL10P02778 98 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 PYGBP11216 843 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 COL6A1P12109 1028 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 PRKCHP24723 683 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 YWHAQP27348 245 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 CORO7P57737 925 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 GPR17Q13304 367 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 TEX44Q53QW1 395 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 LRRC8BQ6P9F7 803 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 GSDMBQ8TAX9 411 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 SLC39A13Q96H72 371 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 FCRL3Q96P31 734 aaPredicted RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 TTPALQ9BTX7 342 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 SAGE1Q9NXZ1 904 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 COL4A6Q14031 1691 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 GOLGA6L7A0A1B0GV03 622 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 PRPF4O43172 522 aaKnown RBP eCLIP12.49□□□□□ -0.41
LIN54-206ENST00000506560 STK10O94804 968 aaKnown RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 RASA2Q15283 850 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 GKAP1Q5VSY0 366 aaPredicted RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 BEND5Q7L4P6 421 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 BANPQ8N9N5 519 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms