RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 ERLEC1Q96DZ1 483 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 NEU3Q9UQ49 428 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 RAD54BQ9Y620 910 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 STON1Q9Y6Q2 735 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 SCINQ9Y6U3 715 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 DOCK4Q8N1I0 1966 aa18.81■□□□□ 0.6
PDLIM7-216ENST00000506537 DRGXA6NNA5 263 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 FAM72CH0Y354 149 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 PSMA2P25787 234 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 CSKP41240 450 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 SCAPQ12770 1279 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 SRSF5Q13243 272 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 SLC18A3Q16572 532 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 PITRM1Q5JRX3 1037 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 FAM72AQ5TYM5 149 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 MANEALQ5VSG8 457 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 ANO7Q6IWH7 933 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 FAM72DQ6L9T8 149 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 RASSF3Q86WH2 238 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 FAM72BQ86X60 149 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 APCDD1Q8J025 514 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 ARFGAP1Q8N6T3 406 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 MDGA1Q8NFP4 955 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 FNIP1Q8TF40 1166 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 UCMAQ8WVF2 138 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 ATRIPQ8WXE1 791 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 MPP6Q9NZW5 540 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 ZNF212Q9UDV6 495 aa18.8■□□□□ 0.6
PDLIM7-216ENST00000506537 CKAP5Q14008 2032 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 TCRBV21S2A2A0A5A6 115 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 TIMM44O43615 452 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 CLDN11O75508 207 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 CYP1A2P05177 515 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 PRKCHP24723 683 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 MZF1P28698 734 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 NUMBP49757 651 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 GALCP54803 685 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 CDH4P55283 916 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 NRG1Q02297 640 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 PLEKHG6Q3KR16 790 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 ACBD5Q5T8D3 534 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 CCDC117Q8IWD4 279 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 TTC17Q96AE7 1141 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 PACSIN1Q9BY11 444 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 OSBPL2Q9H1P3 480 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 KIAA1522Q9P206 1035 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 EBF1Q9UH73 591 aa18.79■□□□□ 0.6
PDLIM7-216ENST00000506537 ZFHX2Q9C0A1 2572 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 CCDC163A0A0D9SF12 145 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 NPC1O15118 1278 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 AXIN1O15169 862 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 HRO43593 1189 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 DLDP09622 509 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 POLR2EP19388 210 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 CTSOP43234 321 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 TSR1Q2NL82 804 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 SCYL2Q6P3W7 929 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 LRRC31Q6UY01 552 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 TFAP2DQ7Z6R9 452 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 PYROXD2Q8N2H3 581 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 ALG14Q96F25 216 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 MYO19Q96H55 970 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 PEBP4Q96S96 227 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 TPSD1Q9BZJ3 242 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 TMEM245Q9H330 911 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 DEF6Q9H4E7 631 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 NHEJ1Q9H9Q4 299 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 MRPL47Q9HD33 250 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 SPTLC3Q9NUV7 552 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 OR12D3Q9UGF7 316 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 FZD10Q9ULW2 581 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 TBC1D30Q9Y2I9 924 aa18.78■□□□□ 0.6
PDLIM7-216ENST00000506537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 LRIG2O94898 1065 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 HLA-EP13747 358 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 GABRG2P18507 467 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 ZNF177Q13360 481 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 DAB2IPQ5VWQ8 1189 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 SDE2Q6IQ49 451 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 SERPINA13PQ6UXR4 307 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 CYP4V2Q6ZWL3 525 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 SLFN11Q7Z7L1 901 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 ZNF366Q8N895 744 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 HMGB4Q8WW32 186 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 MRGPRX3Q96LB0 322 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 NUP85Q9BW27 656 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 POLMQ9NP87 494 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 PPARGC1AQ9UBK2 798 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 OR51B4Q9Y5P0 310 aa18.77■□□□□ 0.6
PDLIM7-216ENST00000506537 GPR179Q6PRD1 2367 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 AKR1B10O60218 316 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 ATP5BP06576 529 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 PLK1P53350 603 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 SEMA3BQ13214 749 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 SLC12A1Q13621 1099 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms