RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TTLL3Q9Y4R7 772 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 COPG1Q9Y678 874 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 TIAM1Q13009 1591 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CEP170BQ9Y4F5 1589 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PTPRTO14522 1441 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 PTPRKQ15262 1439 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CNTLNQ9NXG0 1405 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CDC42BPAQ5VT25 1732 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CLTCQ00610 1675 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GOLGA6L10A0A0M3HER8 536 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 WDR27A2RRH5 827 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 SH2D7A6NKC9 451 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GRM8O00222 908 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TNPO2O14787 897 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 MPPED1O15442 326 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TJP3O95049 919 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 C1RP00736 705 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NR2F6P10588 404 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 EGR2P11161 476 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ITGAMP11215 1152 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZFP36P26651 326 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GGT5P36269 586 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 STAT1P42224 750 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 JAK3P52333 1124 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 DRG2P55039 364 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CDH15P55291 814 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 IRX6P78412 446 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NUCB1Q02818 461 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 MPP3Q13368 585 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ALKBH1Q13686 389 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 EIF4A2Q14240 407 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ERV3-1Q14264 604 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GPR162Q16538 588 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ABHD17BQ5VST6 288 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 FAM205BPQ63HN1 556 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TMEM88Q6PEY1 159 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 INO80CQ6PI98 192 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC22A25Q6T423 547 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 C16orf54Q6UWD8 224 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCDC129Q6ZRS4 1044 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 Q6ZWC4 215 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 USP51Q70EK9 711 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 H1FNTQ75WM6 255 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF551Q7Z340 670 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CPLX4Q7Z7G2 160 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADGRG6Q86SQ4 1221 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 DIS3L2Q8IYB7 885 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GALNT4Q8N4A0 578 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NGEFQ8N5V2 710 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 C12orf76Q8N812 135 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF366Q8N895 744 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 LSM14AQ8ND56 463 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NFKBIDQ8NI38 313 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CLEC4CQ8WTT0 213 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CUL5Q93034 780 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 RFKQ969G6 155 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 RSRC1Q96IZ7 334 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ELOVL1Q9BW60 279 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARHGAP39Q9C0H5 1083 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CLPBQ9H078 707 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 INTS2Q9H0H0 1204 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CDCP1Q9H5V8 836 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 THAP1Q9NVV9 213 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NSMCE4AQ9NXX6 385 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TAS2R10Q9NYW0 307 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CEP72Q9P209 647 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TBC1D14Q9P2M4 693 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CFDP1Q9UEE9 299 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 ST6GALNAC2Q9UJ37 374 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CD207Q9UJ71 328 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 GPR34Q9UPC5 381 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CAMK2AQ9UQM7 478 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 NAALADL1Q9UQQ1 740 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 TESMINQ9Y4I5 508 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 EHBP1L1Q8N3D4 1523 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 CAMSAP2Q08AD1 1489 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 KAT6AQ92794 2004 aa3.53□□□□□ -1.84
TRAPPC11-205ENST00000506426 SUPT6HQ7KZ85 1726 aaKnown RBP3.53□□□□□ -1.85
TRAPPC11-205ENST00000506426 CEP162Q5TB80 1403 aa3.53□□□□□ -1.85
TRAPPC11-205ENST00000506426 CENPVL1A0A0U1RR11 272 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 PIPSLA2A3N6 862 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 TTC34A8MYJ7 566 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 VWC2LB2RUY7 222 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 H3BNC9 293 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 SUV39H1O43463 412 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZNF500O60304 480 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 METTL18O95568 372 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 SCGB1D1O95968 90 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 PEX11BO96011 259 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC3A2P08195 630 aaKnown RBP3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPSP0C0P6 89 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 UBL4AP11441 157 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 NDUFB7P17568 137 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 ENGP17813 658 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 ALOX12P18054 663 aa3.52□□□□□ -1.85
TRAPPC11-205ENST00000506426 CTGFP29279 349 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms